DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment DCTN6-p27 and dctn6

DIOPT Version :10

Sequence 1:NP_609949.1 Gene:DCTN6-p27 / 35195 FlyBaseID:FBgn0086446 Length:185 Species:Drosophila melanogaster
Sequence 2:NP_001039059.1 Gene:dctn6 / 733845 XenbaseID:XB-GENE-5784833 Length:201 Species:Xenopus tropicalis


Alignment Length:172 Identity:84/172 - (48%)
Similarity:116/172 - (67%) Gaps:7/172 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 IKILPKAVVCEESSLRGDITFSSGCVVHPSATVIADAGPIIIGENCIIEEYATVAH----RLEPG 67
            :||.|.||||.||.::||:|.....||||.|.:.|:||||||||..:|||.|.:.:    .:.|.
 Frog    21 VKIAPGAVVCVESEIKGDVTIGPRTVVHPKARIYAEAGPIIIGEGNLIEEQAFIRNSFPENIAPD 85

  Fly    68 AVWDVN-NILSIGTHNVFEVGCQVEAAKIGDKNVFESKCYVGPGVTVSSGCVVGAGIKIHGSQRL 131
            :  ||. ..:.|||:|||||||..:|.|:||.||.|||.:||..|.::|||::||..::...:.:
 Frog    86 S--DVEPKTMIIGTNNVFEVGCYSQAMKMGDNNVIESKAFVGRNVILTSGCIIGACCQVDTCEVI 148

  Fly   132 PENTIVYGEQGLQREAIDKQGSQTLQIDFLRKVLPNYHHLRK 173
            ||||::||...|:|...::...||||:|||.|:|||||||:|
 Frog   149 PENTVIYGSDCLRRVQTERPQPQTLQLDFLMKILPNYHHLKK 190

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DCTN6-p27NP_609949.1 LbH_Dynactin_6 8..173 CDD:100052 83/169 (49%)
dctn6NP_001039059.1 LbH_Dynactin_6 22..190 CDD:100052 83/169 (49%)

Return to query results.
Submit another query.