DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment AsnRS and NS1

DIOPT Version :9

Sequence 1:NP_001260561.1 Gene:AsnRS / 35194 FlyBaseID:FBgn0086443 Length:558 Species:Drosophila melanogaster
Sequence 2:NP_001328216.1 Gene:NS1 / 827443 AraportID:AT4G17300 Length:587 Species:Arabidopsis thaliana


Alignment Length:592 Identity:150/592 - (25%)
Similarity:246/592 - (41%) Gaps:130/592 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 SKPFKTILQAMRHAGKEPFPTIYVDTK---------------DPNAAEPYEPAAKSQLKKI-QKL 79
            |.|..::.:.:|.....||.....:::               |.|..|.||....|::.:. :||
plant    48 SNPSYSLFRPLRRRVLPPFDAFPANSRRRCFCTAVSESLGSGDGNKVESYEKRFGSKVGEFRKKL 112

  Fly    80 FVRESHKNADKLQREAEDAEKRQQNLEDARKVKISEDPSLPVARKIRIYEGTANRDSRVKVYGWV 144
            .:.|....||                                       ||.:.....:.:.|||
plant   113 RIAEVKGGAD---------------------------------------EGLSRVGQSLNIMGWV 138

  Fly   145 HRLRRQGKSLIFITLRDGT--GFLQCVLNDQLCQTYDAL---TLSTESSVVLFGTLKLVPEGKTA 204
            ..||.| .|:.||.:.||:  ..||||:... .:.||.:   ::.|.:||.:.||: :..:|...
plant   139 RTLRSQ-SSVTFIEINDGSCLSNLQCVMTSD-AEGYDQVESGSILTGASVSVQGTI-VASQGTKQ 200

  Fly   205 PGGHELNVDYWELIGLAPPGGADAILNEEAQPDVQLDNRHIMIRGENTSKVLKMRSVVTQAFRGH 269
            .  .||.|:  ::|.:.....:..|..:....:......|:..|......|.::|:.:..|....
plant   201 K--VELKVE--KIIVVGECDSSYPIQKKRVSREFLRTKAHLRPRTNTFGAVARVRNTLAYATHKF 261

  Fly   270 YEARGYNEVTPPTLVQTQVEGGSTLF---------------------KLK---------YFGEEA 304
            ::..|:..|..|.:..:..||....|                     |.|         :||:.|
plant   262 FQESGFVWVASPIITASDCEGAGEQFCVTTLIPSSHENTDTSIDAIPKTKGGLIDWSQDFFGKPA 326

  Fly   305 YLTQSSQLYLETCLPALGDVFTISQSYRAEQSRTRRHLAEYTHVEAECPFLTFDDLLDRLEDLVC 369
            :||.|.||..||...||.||:|...::|||.|.|.|||||:..:|.|..|...||      |:.|
plant   327 FLTVSGQLNGETYATALSDVYTFGPTFRAENSNTSRHLAEFWMIEPELAFADLDD------DMAC 385

  Fly   370 DV--VDRVLKSPWGYLVKELNPDFK----------------PPQKPFRRMNYEDAIKWLKENNVT 416
            ..  :..|:|    |::.....|.:                ..:|.|.::.|.|||:.|.:.|..
plant   386 ATAYLQYVVK----YVLDNCKEDMEFFDTWIEKGIIRRLSDVAEKEFLQLGYTDAIEILLKANKK 446

  Fly   417 KDDGTFYEFGEDIPEAPERKMTDTI--NEPIMLCRFPAEIKSFYMQRCKEDQRLTESVDVLLPNV 479
            .|...  ::|.|:....||.:|:..  ..|:::..:|.|||:||| |..:|.:...::|:|:|.:
plant   447 FDFPV--KWGLDLQSEHERYITEEAFGGRPVIIRDYPKEIKAFYM-RENDDGKTVAAMDMLVPRI 508

  Fly   480 GEIVGGSMRIYDSEELLKGYKREGIDPQPYYWYTDQRVYGTMPHGGYGLGLERFLCWLLNRYHIR 544
            ||::|||.|....|.|........::.:.|:||.|.|.||::||.|:|||.||.:.::....:||
plant   509 GELIGGSQREERLEVLEARLDELKLNKESYWWYLDLRRYGSVPHAGFGLGFERLVQFVTGIDNIR 573

  Fly   545 EVCLYPR 551
            :|..:||
plant   574 DVIPFPR 580

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AsnRSNP_001260561.1 AsnS 122..558 CDD:223096 134/485 (28%)
AsnRS_cyto_like_N 137..219 CDD:239818 26/86 (30%)
AsxRS_core 233..552 CDD:238399 104/369 (28%)
NS1NP_001328216.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0017
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1056670at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

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