DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment AsnRS and mfrn

DIOPT Version :9

Sequence 1:NP_001260561.1 Gene:AsnRS / 35194 FlyBaseID:FBgn0086443 Length:558 Species:Drosophila melanogaster
Sequence 2:NP_651600.1 Gene:mfrn / 43353 FlyBaseID:FBgn0039561 Length:379 Species:Drosophila melanogaster


Alignment Length:69 Identity:15/69 - (21%)
Similarity:29/69 - (42%) Gaps:22/69 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 TSEKKGSDESGDGSESK-----------------PFKTILQ-AMRHAGKEPFPTIYVDTKDPNAA 62
            |::::..|:..:.::.|                 ..||:.: :.|.||    |||.:.|:..:..
  Fly   310 TTDEEQIDQEREAAKEKDTTATLHSAPTSVNASGAIKTVCELSTRPAG----PTINLHTRHTDVK 370

  Fly    63 EPYE 66
            .|||
  Fly   371 SPYE 374

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AsnRSNP_001260561.1 AsnS 122..558 CDD:223096
AsnRS_cyto_like_N 137..219 CDD:239818
AsxRS_core 233..552 CDD:238399
mfrnNP_651600.1 Mito_carr 13..98 CDD:278578
PTZ00168 17..280 CDD:185494
Mito_carr 107..190 CDD:278578
Mito_carr <215..282 CDD:278578
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1056670at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.010

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