DRSC/TRiP Functional Genomics Resources

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Protein Alignment l(2)37Cd and sfc1

DIOPT Version :10

Sequence 1:NP_609947.1 Gene:l(2)37Cd / 35193 FlyBaseID:FBgn0086445 Length:480 Species:Drosophila melanogaster
Sequence 2:NP_593297.1 Gene:sfc1 / 2542856 PomBaseID:SPAC6F12.11C Length:456 Species:Schizosaccharomyces pombe


Alignment Length:500 Identity:119/500 - (23%)
Similarity:208/500 - (41%) Gaps:95/500 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 SRQLSFNPQKEYELIEYPGRVVNPDRMIATLGGIINVSKVLGDEVKR-----LALHFHPENPYNK 61
            |.::|.|   ||.|||:||...|.|....||||:.::.|......:.     |.|:..|::.|:.
pombe     3 SLKISDN---EYALIEHPGFANNKDAFFQTLGGVQSIQKACQTSFQNPKQALLELNLRPKDKYHH 64

  Fly    62 PTFGDCTDKTGVLLSITVRRHKKDKQRPPEYFVRVLGHCSRSFTFETLCDFQYLPLWSTPKSDNA 126
            |.......:..:|::|    .|.|..      |:.:....:.|.|..:.||||       .:.|:
pombe    65 PVQARVQSRNDLLVTI----KKMDNS------VQNVSRIRQVFLFRDMADFQY-------STQNS 112

  Fly   127 NAAQELTYALDQLK----PKNTTDLDYFKRRHSQL--------LALPELFTHVDTVYAGTYRIDP 179
            ...|:|...|..|.    .|.:.||...:|:|..:        .:||..:..:.....|..|:  
pombe   113 PFVQKLDSTLRVLDYNAINKFSIDLTPVQRKHVDMPPPPVFSQTSLPMSYNFLQNPLVGRVRL-- 175

  Fly   180 SEDGQHEVLGVQSKSSYDNQGVVSFNM-VDSFPTQADSQNLKRLKVKYVSDEQLALVKKLFDDCP 243
             .:|:..::.::.:.   ...:::.|| |:|.||   .::.|..:......|.:..:|.||:..|
pombe   176 -PNGKTTIVNLKGQC---RVWIITTNMGVESVPT---CRHSKLGEPSKTIQEVIEALKPLFEKRP 233

  Fly   244 IWTRIAL--QYESGLTNDKLKCITPSLAFYFSNGPWRTLYVRFGYDPRKDFNSRYYQTFDFRLRF 306
            :|||.||  ..:...|: .||...|.|::.:::||:|..|.|||||||||.|:..||...|:|:.
pombe   234 VWTRRALLNHLDPSYTH-YLKFALPYLSYLWTSGPFRDTYTRFGYDPRKDSNAAAYQALFFKLKL 297

  Fly   307 S---TGLSEFVYAKKFVKQRRAANAPFAPIEDRVSDLVQDIDYPYFDEHKLPRSRQCMLRYCDVR 368
            :   .|....|:..|.:                                 .|.:|  :.:.||:.
pombe   298 NGKHKGTKTHVFDGKTL---------------------------------FPTNR--VYQVCDIV 327

  Fly   369 MTRIQEMLEKIPTPLTGAVCNERTGWLPPGFDAQVRQIVCASISELLRNHYRKENLTAEVEAVTQ 433
            ...|..:|:  .|.|. :.|:..|||...|...:||.::...:..|:......|   ..|..:..
pombe   328 DPTIAPLLK--DTQLR-SECHRDTGWYRSGRYYKVRDLMREKLFALIEGEMPSE---VAVNMILN 386

  Fly   434 ADEEDEDEAEDEETQEEDMELDETQAMGNSEQFVDNDIEQLFDNI 478
            |:|.:|.:......::::.:|::| ..|.:....|:.|..|..|:
pombe   387 AEEVEESDRYSNFDEQDNTDLNDT-VRGLNTSATDDRINDLMRNL 430

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
l(2)37CdNP_609947.1 Tau95_N 16..115 CDD:465457 26/103 (25%)
Tau95 160..303 CDD:462865 43/145 (30%)
sfc1NP_593297.1 Tau95_N 12..108 CDD:465457 28/112 (25%)
Tau95 147..294 CDD:462865 43/156 (28%)

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