DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment l(2)37Cb and DHX34

DIOPT Version :9

Sequence 1:NP_609946.1 Gene:l(2)37Cb / 35192 FlyBaseID:FBgn0086444 Length:894 Species:Drosophila melanogaster
Sequence 2:NP_055496.2 Gene:DHX34 / 9704 HGNCID:16719 Length:1143 Species:Homo sapiens


Alignment Length:742 Identity:244/742 - (32%)
Similarity:376/742 - (50%) Gaps:95/742 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    73 EDRDKIVPHLRLQSRRQYLEKRKDDKVAELEADILDDEYLFDESVLTKREKEEREYKKQLLNIAK 137
            |.||: ..|.|..|..:.||| .|....|... :|:|.:..:|..:.:..:|.:::         
Human     8 EGRDR-RDHHRAPSEEEALEK-WDWNCPETRR-LLEDAFFREEDYIRQGSEECQKF--------- 60

  Fly   138 EHEKARELERIQRYNMPQDLKKGERSEYVEVDEFEKQPNSEQKKWEAEQLA------SARFHFG- 195
                ....||:||:   |:||...:.        ||.|.  |.|.....||      ..|:... 
Human    61 ----WTFFERLQRF---QNLKTSRKE--------EKDPG--QPKHSIPALADLPRTYDPRYRINL 108

  Fly   196 -------------AKDAKAEEEYELLLDDQIDFIQALT--LDGSREKSSSRQPELTEKERKRLTL 245
                         .:...||...|        |.:||.  ||..::::..|..:|..:       
Human   109 SVLGPATRGSQGLGRHLPAERVAE--------FRRALLHYLDFGQKQAFGRLAKLQRE------- 158

  Fly   246 DETRRSLPVYPFKEDLIAAVKEHQVLIIEGETGSGKTTQVPQYLVEAGFTKDKKMIGCTQPRRVA 310
               |.:||:..:...::..:|||||:::.|:||.||:|||||||:.|||:.    :.||||||:|
Human   159 ---RAALPIAQYGNRILQTLKEHQVVVVAGDTGCGKSTQVPQYLLAAGFSH----VACTQPRRIA 216

  Fly   311 AMSVAARVAEEMGVKLGNEVGYSIRFEDCTSDRTILKYMTDGTLHREFLSEPDLASYSVMIIDEA 375
            .:|:|.||..|...:.|::|||.||||...|..|.:.::|.|.|.|:...||.|..|.|:|:||.
Human   217 CISLAKRVGFESLSQYGSQVGYQIRFESTRSAATKIVFLTVGLLLRQIQREPSLPQYEVLIVDEV 281

  Fly   376 HERTLHTDILFGLVKDIARFRPELKLLISSATLDAEKFSAFFDDAPIFRIPGRRYPVDIFY---- 436
            |||.||.|.|.|:::.:...||:||:::.|||::...||::|.:||:.::|||.:|:.:.|    
Human   282 HERHLHNDFLLGVLQRLLPTRPDLKVILMSATINISLFSSYFSNAPVVQVPGRLFPITVVYQPQE 346

  Fly   437 -----TKAPEADYIDACCV--SVLQIHATQPLGDILVFLTGQDEIETCQEVLHDRVKRLGSKIRE 494
                 :|:.:.|......|  |:...:..:..||:||||:|..||....|.    .:...|..:.
Human   347 AEPTTSKSEKLDPRPFLRVLESIDHKYPPEERGDLLVFLSGMAEISAVLEA----AQTYASHTQR 407

  Fly   495 LIVIPVYANLPSDMQAKIFEPTPPNARKVILATNIAETSLTIDNIIYVIDPGFAKQNNFNSRTGM 559
            .:|:|:::.|....|.|:|:..||..||.||:|||||||:|||.|.:|:|.|..|:.:::.:..:
Human   408 WVVLPLHSALSVADQDKVFDVAPPGVRKCILSTNIAETSVTIDGIRFVVDSGKVKEMSYDPQAKL 472

  Fly   560 ESLMVVPISKASANQRAGRAGRTAPGKCFRLYTAWAYKHELEDNTVPEIQRINLGNAVLMLKALG 624
            :.|....||:|||.||.||||||.||.|||||....| .......||||:|:.|.:.||.:|::.
Human   473 QRLQEFWISQASAEQRKGRAGRTGPGVCFRLYAESDY-DAFAPYPVPEIRRVALDSLVLQMKSMS 536

  Fly   625 INDLIHFDFLDPPPHETLVLALEQLYALGALNHHGELTKLGRRMAEFPVDPMMGKMLLASEKYKC 689
            :.|...|.|::|||..:|..|:..|...|||:....||.:|..:|:.|||.::||||:....:..
Human   537 VGDPRTFPFIEPPPPASLETAILYLRDQGALDSSEALTPIGSLLAQLPVDVVIGKMLILGSMFSL 601

  Fly   690 SEEMVTIAAMLSVNSAIFYRPKDKIIHADTARKNFNHMHGDHLSLLQVYNQWAE-----TDYSTQ 749
            .|.::||||.|||.|. |.|..........||:......||..:|..|:|.|.:     :..|.:
Human   602 VEPVLTIAAALSVQSP-FTRSAQSSPECAAARRPLESDQGDPFTLFNVFNAWVQVKSERSRNSRK 665

  Fly   750 WCYENFIQYRSMKRARDVREQLVGLMQ 776
            ||....|:...:....::|.|...|::
Human   666 WCRRRGIEEHRLYEMANLRRQFKELLE 692

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
l(2)37CbNP_609946.1 HrpA 222..867 CDD:224557 207/571 (36%)
DEXDc 269..408 CDD:238005 65/138 (47%)
HELICc 491..581 CDD:197757 38/89 (43%)
HA2 651..735 CDD:214852 29/83 (35%)
OB_NTP_bind 770..869 CDD:285018 2/7 (29%)
DHX34NP_055496.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..24 6/16 (38%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 75..94 5/28 (18%)
HrpA 154..>686 CDD:224557 203/551 (37%)
DEXDc 179..314 CDD:238005 65/138 (47%)
DEAH box 279..282 2/2 (100%)
HELICc 410..496 CDD:197757 40/85 (47%)
HA2 565..645 CDD:214852 29/80 (36%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 724..766
OB_NTP_bind <791..911 CDD:285018
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1643
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

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