Protein Alignment l(2)37Cb and hrpB

DIOPT Version :10

• Sequence 1: NP_609946.1
• Gene: l(2)37Cb / 35192
• FlyBaseID: FBgn0086444
• Length: 894
• Species: Drosophila melanogaster
• Sequence 2: NP_414690.4
• Gene: hrpB / 944845
• ECOCYCID: EG12329
• Length: 809
• Species: Escherichia coli
• Alignment Length: 460
• Identity: 169/460 - (36%)
• Similarity: 251/460 - (54%)
• Gaps: 29/460 - (6%)

  Fly   251 SLPVYPFKEDLIAAVKEHQVLIIEGETGSGKTTQVP-QYLVEAGFTKDKKMIGCTQPRRVAAMSV 314
            ||||.....:|:.|:.....:::...||:||:|.:| |.|...|.  :.|:| ..:|||:||.:|
E. coli     3 SLPVAAVLPELLTALDCAPQVLLSAPTGAGKSTWLPLQLLAHPGI--NGKII-LLEPRRLAARNV 64

  Fly   315 AARVAEEMGVKLGNEVGYSIRFEDCTSDRTILKYMTDGTLHREFLSEPDLASYSVMIIDEAHERT 379
            |.|:||.:..|.|:.|||.:|.::|....|.|:.:|:|.|.|....:|:|:...::|:||.|||:
E. coli    65 AQRLAELLNEKPGDTVGYRMRAQNCVGPNTRLEVVTEGVLTRMIQRDPELSGVGLVILDEFHERS 129

  Fly   380 LHTDILFGLVKDIAR-FRPELKLLISSATLDAEKFSAFFDDAPIFRIPGRRYPVDIFYTKAP-EA 442
            |..|:...|:.|:.: .|.:|||||.|||||.::......:||:....||.:||:..|...| ..
E. coli   130 LQADLALALLLDVQQGLRDDLKLLIMSATLDNDRLQQMLPEAPVVISEGRSFPVERRYLPLPAHQ 194

  Fly   443 DYIDACCVSVLQIHATQPLGDILVFLTGQDEIETCQEVLHDRVKRLGSKIRELIVIPVYANLPSD 507
            .:.||..|:..:: ..|..|.:|:||.|..||:..||.|   ..|:||   ::::.|:|..|..:
E. coli   195 RFDDAVAVATAEM-LRQESGSLLLFLPGVGEIQRVQEQL---ASRIGS---DVLLCPLYGALSLN 252

  Fly   508 MQAKIFEPTPPNARKVILATNIAETSLTIDNIIYVIDPGFAKQNNFNSRTGMESLMVVPISKASA 572
            .|.|...|.|...|||:||||||||||||:.|..|:|....:...|:.|||:..|:...:|:||.
E. coli   253 DQRKAILPAPQGMRKVVLATNIAETSLTIEGIRLVVDCAQERVARFDPRTGLTRLITQRVSQASM 317

  Fly   573 NQRAGRAGRTAPGKCFRLYTAWAYKHELE---DNTVPEIQRINLGNAVLMLKALGINDLIHFDFL 634
            .||||||||..||....|..    |.:.|   ..:.|||.:.:|...::.|...|.:|.....:|
E. coli   318 TQRAGRAGRLEPGISLHLIA----KEQAERAAAQSEPEILQSDLSGLLMELLQWGCSDPAQMSWL 378

  Fly   635 DPPPHETLVLALEQLYALGALNHHGE-LTKLGRRMAEFPVDPMMGKMLLASEKYKCSEEMVT--- 695
            |.||...|:.|...|..||||  .|| |:..|::||....||.:..||:::   |..:|..|
E. coli   379 DQPPVVNLLAAKRLLQMLGAL--EGERLSAQGQKMAALGNDPRLAAMLVSA---KNDDEAATAAK 438

  Fly   696 IAAML 700
            |||:|
E. coli   439 IAAIL 443

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
l(2)37Cb	NP_609946.1	PTZ00121	<6..267	CDD:173412	6/15 (40%)
		HrpA	251..>868	CDD:441249	169/460 (37%)
hrpB	NP_414690.4	PRK11664	1..809	CDD:236950	169/460 (37%)