DRSC/TRiP Functional Genomics Resources

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Protein Alignment l(2)37Cb and Dqx1

DIOPT Version :9

Sequence 1:NP_609946.1 Gene:l(2)37Cb / 35192 FlyBaseID:FBgn0086444 Length:894 Species:Drosophila melanogaster
Sequence 2:NP_291084.1 Gene:Dqx1 / 93838 MGIID:2136388 Length:718 Species:Mus musculus


Alignment Length:668 Identity:229/668 - (34%)
Similarity:359/668 - (53%) Gaps:47/668 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly   247 ETRRSLPVYP----FKEDLIAAVKEHQVLIIEGETGSGKTTQVPQYLVE----AGFTKDKKMIGC 303
            |.||:||::.    |.|.|.::  ...|:::.|:.||||:||:||:..|    .||...:  :..
Mouse    37 EQRRALPIWAARFLFLEHLESS--PTGVVLVSGDPGSGKSTQIPQWCAEFALARGFQTGQ--VTV 97

  Fly   304 TQPRRVAAMSVAARVAEEMGVKLGNEVGYSIRFEDCTSDRTILKYMTDGTLHREFLSEPDLASYS 368
            |||..:||||:|:|||:||.:.||:|:||||..||||...|:|::..|....:|..|.....::|
Mouse    98 TQPYPLAAMSLASRVADEMDLTLGHEIGYSIPQEDCTGPNTMLRFCWDRLFLQEVASTRGPGAWS 162

  Fly   369 VMIIDEAHERTLHTDILFGLVKDIARFR-----PELKLLISSATLDAEKFSAFFDDAPIFRIPGR 428
            |:|:|||.||::.:|:|.||::| .|.|     |.: ::::...|: .||.||:.::||.|:|  
Mouse   163 VLILDEAQERSVASDLLQGLLRD-TRLRNLPGDPRV-VVVTDPALE-PKFQAFWGNSPIVRVP-- 222

  Fly   429 RYP---VDIFYTKAPEADYIDACCVSVLQI-HATQPLGDILVFLTGQDEIETCQEVLHDRVKRLG 489
            |.|   ..:.|......|.::|.|.:||:: ...:..||:||:|..::||..|.|.|...:..|.
Mouse   223 REPGGDPTLAYKDTVPTDLVEAACQAVLELCQQEEAPGDVLVYLPSEEEISLCCESLSGEMGTLA 287

  Fly   490 SKIRELIVIPVYANLPSDMQAKIFEPTPPNARKVILATNIAETSLTIDNIIYVIDPGFAKQNNFN 554
            .......|:|::......:|. ::|.|..:.||:::...:|:.|.::.:|.:|||.|...::.:|
Mouse   288 VPGPPPRVLPLHPGCAQAIQT-VYEDTDVSVRKIVVTHWLADFSFSLPSIQHVIDSGLELRSVYN 351

  Fly   555 SRTGMESLMVVPISKASANQRAGRAGRTAPGKCFRLYTAWAYKHELEDNTVPEIQRINLGNAVLM 619
            .|...||.::.||||..|..|..||....||.|.|||:....:.|......|::...||.:.||:
Mouse   352 PRIRAESQVLRPISKCQAEARLLRAKGFPPGSCLRLYSKSTLELEAPPLPHPKVCEENLSSLVLL 416

  Fly   620 LKALGINDLIHFDFLDPPPHETLVLALEQLYALGALNHHGELTKLGRRMAEFPVDPMMGKMLLAS 684
            |....|.:.....|||.|..|.|:.|||.|..|.|||..|||:.||..::|||:.|.:.|.||||
Mouse   417 LMRKQIAEPGECHFLDRPAPEALMRALEDLDYLAALNDDGELSDLGVILSEFPLPPELAKALLAS 481

  Fly   685 EKYKCSEEMVTIAAMLSVNSAIFYRPKDKIIHADTA--RKNFNHMHGDHLSLLQVYNQWAETDYS 747
            .::.|.:||:|:||||:.... |.||.   :.|..|  |:...|..|||.||:|||..:.::...
Mouse   482 CEFNCVDEMLTLAAMLTAAPG-FTRPP---LSAGEAALRRALEHADGDHSSLIQVYEAFVQSGAD 542

  Fly   748 TQWCYENFIQYRSMKRARDVREQLVGLMQRVEIDM----VSCLPETVNVRKAATAGYFYHVARLS 808
            ..||....:.:.|:.:||.:|.:||.||||:|:.:    ........:::||..:|||..|||.:
Mouse   543 EAWCQARGLNWESLCQARKLRAELVELMQRIELPLSQPAFGSEQNRRDLQKALLSGYFLKVARDT 607

  Fly   809 KG-GHYKTIKHNQTVMIHP-----NSSLFEELPRWVLYHELVFTSKEYMRQVIEIESKWLLEVAP 867
            .| |:|..:.|.....:.|     |.....:.|.|||||....:....:..|.||:.:.|:|:||
Mouse   608 DGTGNYLLLTHKHVAQLSPYCSYRNRRTPAQPPTWVLYHSFSISKDNCLCIVSEIQPEMLVELAP 672

  Fly   868 HYYKA----KELEDSTNK 881
            .|:.:    .|..|..|:
Mouse   673 PYFLSNLPPSESRDLLNQ 690

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
l(2)37CbNP_609946.1 HrpA 222..867 CDD:224557 223/648 (34%)
DEXDc 269..408 CDD:238005 58/147 (39%)
HELICc 491..581 CDD:197757 26/89 (29%)
HA2 651..735 CDD:214852 37/85 (44%)
OB_NTP_bind 770..869 CDD:285018 34/108 (31%)
Dqx1NP_291084.1 HrpA 9..672 CDD:224557 223/648 (34%)
DEAQ box 167..170 2/2 (100%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 690..718 0/1 (0%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1643
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D354219at2759
OrthoFinder 1 1.000 - - FOG0000059
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.820

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