DRSC/TRiP Functional Genomics Resources

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Protein Alignment l(2)37Cb and YLR419W

DIOPT Version :9

Sequence 1:NP_609946.1 Gene:l(2)37Cb / 35192 FlyBaseID:FBgn0086444 Length:894 Species:Drosophila melanogaster
Sequence 2:NP_013523.3 Gene:YLR419W / 851137 SGDID:S000004411 Length:1435 Species:Saccharomyces cerevisiae


Alignment Length:1145 Identity:275/1145 - (24%)
Similarity:468/1145 - (40%) Gaps:335/1145 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 EESRLKDLQERDEFASRLKKRDDDRTRNVVDSTGGRRAIEEATKRLKLEHEDRDKIVPH------ 81
            |:.:||..:|:::.|...:.:.:...|.::.|.||   |..:.|    :.::| |:..|      
Yeast   197 EDRKLKAQREKEQVAQNNQAQKEQVARTILSSHGG---ISSSGK----DRQER-KVASHKNSHNP 253

  Fly    82 --LRL--------------QSRRQYLEKRKDDKVAELEADILDDEYLFDESVLTKREKEEREYKK 130
              :|.              :|.||.:|....:|: :.:|..:..:   :|::...||    :.|.
Yeast   254 SLVRFPKKVWENSIFVDLDESSRQLIETSLKEKI-DWQAKKISHK---NETIAENRE----DLKA 310

  Fly   131 QLLNI---AKEHEKA---RELERIQRYNMPQD-------LKKGERSEYVEV-------------- 168
            :||.:   .|..|:|   ::......:|:|:|       .|||:....||:              
Yeast   311 KLLTLQFRPKHVEEAMLYKDPLSFLLFNLPEDDLPPFFHKKKGDTKNKVEITNLPLSTRMIVERL 375

  Fly   169 -------DEF-----------------------------EKQPNSEQKK---W--EAEQLASARF 192
                   ||.                             ..:|.||.:.   |  |.|.|.|. :
Yeast   376 TEIGVSSDEALLALQQNDMNENEAAGFLTREILPTLNSNTNEPVSETESIECWNQELESLESI-Y 439

  Fly   193 HFGAKDAKAEEEYELLLDDQI-------------------------------DFI--QALT---- 220
            .....|||.:..|.|.|.:::                               |:|  |.||    
Yeast   440 EGCVMDAKEDSHYTLNLIEKLKIKLKVYRTKNYPASLPGIVVSTFDKNYKLPDYIKKQILTRLLH 504

  Fly   221 -------------------------------------------------LDGSR--EKSSSRQ-- 232
                                                             .:|.|  ..||||:  
Yeast   505 YLQEGNLIGDMLVYHIYEWLKENISKIIDNPGPLIPDSDSKGAINKRNISNGKRSINNSSSRKFT 569

  Fly   233 ---------PELTEKERKRLTLDE------TRRSLPVYPFKEDLIAAVKEHQVLIIEGETGSGKT 282
                     ..|.|:..||:...|      .|..||.:..::.:|..:.:::|::|.|||||||:
Yeast   570 KTTISEDTLSVLREEYTKRIKSSEYKSMQLVREQLPAWKKQKVIIDIINKNEVVLITGETGSGKS 634

  Fly   283 TQVPQYLVE------AGFTKDKKMIGCTQPRRVAAMSVAARVAEEMGVKLGNEVGYSIRFEDCTS 341
            |||.|::::      ..|.|.|  |.||||||::|:.:|.||::|..|..|.||||.||..:.|.
Yeast   635 TQVVQFILDFLQKEKGDFGKTK--IVCTQPRRISAIGLAERVSDERCVTCGEEVGYVIRGVNKTK 697

  Fly   342 DRTILKYMTDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIARFRPELKLLISSA 406
            ..|.:|:||.|.|.|...:...:...::::|||.|||::.||::..|:|::......:|:::.||
Yeast   698 ASTRIKFMTTGVLVRLLQNARTMLENTIVVIDEVHERSIDTDLIVTLMKNLLHRVRGMKIVLMSA 762

  Fly   407 TLDAEKFSAFFDDAPIFRIPGRRYPV-DIF---------------------------------YT 437
            |::.:.|..||.......|.||.:|: |.|                                 |.
Yeast   763 TVNVDLFKKFFPGLATCHIEGRTFPITDYFLEDILSDLDFKIKREKALSYDDDSVDERNNDDQYL 827

  Fly   438 KAPEAD---------YIDACCVSVLQIH----ATQPLGDILVFLTGQDEIETCQEVLHDRVKRLG 489
            | |.||         ..|..|..|..:|    |....|.|:|||.|..||..|..:|.::     
Yeast   828 K-PRADSKFFTSGQINYDLLCQVVEYVHKRLKAANDNGSIIVFLPGVGEINKCCNLLANK----- 886

  Fly   490 SKIRELIVIPVYANLPSDMQAKIFEPTPPNARKVILATNIAETSLTIDNIIYVIDPGFAKQNNFN 554
            |...:.:|:|:::.|..:.|.::|:.. ...|||:::|||||||:|||:.:..||.|.||...:|
Yeast   887 SNEADFMVLPLHSALTPEDQKRVFKKY-HGKRKVVVSTNIAETSITIDDCVATIDTGRAKSMFYN 950

  Fly   555 SRTGMESLMVVPISKASANQRAGRAGRTAPGKCFRLYTAWAYKHELEDNTVPEIQRINLGNAVLM 619
            .:.....|:...||||...||.|||||...|..::|::...|::::....:|||:||.|.:..|.
Yeast   951 PKDNTTKLIESFISKAEVKQRRGRAGRVREGLSYKLFSKNLYENDMISMPIPEIKRIPLESLYLS 1015

  Fly   620 LKALGINDLIHF--DFLDPPPHETLVLALEQLYALGALNHHGE-LTKLGRRMAEFPV-DPMMGKM 680
            :||:||.|:..|  ..||.||...|..|...|..:|.::...: ||:||:.::..|| |...||:
Yeast  1016 VKAMGIKDVKAFLSTALDAPPLPALQKAERILTTIGLVDESDKSLTQLGQFISLMPVMDSKHGKL 1080

  Fly   681 LLASEKYKCSEEMVTIAAMLSVNSAIF---YRPKDKIIHADTARKNF--NHMHGDHLSLLQV--- 737
            |:....:.|::..|.:.::|.:....|   :..::||      :|..  ....||..::|::   
Yeast  1081 LIYGILFGCTDISVLLVSILGIGVLPFIGGFENREKI------KKLLCKYESRGDLFAVLEIVRD 1139

  Fly   738 YNQWAETDYSTQWCYENFIQYRSMKRARDVREQLVGLMQRV-------EIDMVSCL---PETVNV 792
            |.:..::....::..:|.:.|..:...:....|...:::.|       ::..:|.|   ....::
Yeast  1140 YFKIKDSSIKRKYLRDNLLSYNKINEIKSSTAQYYSILKDVGFLPMDYKVGSISDLNRNERNFDI 1204

  Fly   793 RKAATAGYFY-HVARLSKGGHYKTIKHNQTVMIHPNSSLFEELPR------WVLYHELVFTSKEY 850
            .:|...|.|| |:||:    ....:|:..|     :|...|:.|.      |:       .|:||
Yeast  1205 LRAILTGAFYPHIARV----QLPDVKYLST-----SSGAVEKDPEAKMIKYWI-------RSEEY 1253

  Fly   851 MRQVIEIESKWLLEVAPHYYKAKELEDSTNKKMPKVAGRA 890
            ..::.|.::|...|.     :..:|||     :|..|.||
Yeast  1254 QDKLEEYKTKISQET-----QKVDLED-----LPLPATRA 1283

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
l(2)37CbNP_609946.1 HrpA 222..867 CDD:224557 209/745 (28%)
DEXDc 269..408 CDD:238005 57/144 (40%)
HELICc 491..581 CDD:197757 34/89 (38%)
HA2 651..735 CDD:214852 20/90 (22%)
OB_NTP_bind 770..869 CDD:285018 23/115 (20%)
YLR419WNP_013523.3 UBA_YLR419W_like 369..409 CDD:270457 2/39 (5%)
RWD 426..528 CDD:399058 16/102 (16%)
HrpA 563..1428 CDD:224557 214/762 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1643
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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