DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment l(2)37Cb and ESP3

DIOPT Version :9

Sequence 1:NP_609946.1 Gene:l(2)37Cb / 35192 FlyBaseID:FBgn0086444 Length:894 Species:Drosophila melanogaster
Sequence 2:NP_174527.2 Gene:ESP3 / 840143 AraportID:AT1G32490 Length:1044 Species:Arabidopsis thaliana


Alignment Length:932 Identity:542/932 - (58%)
Similarity:696/932 - (74%) Gaps:49/932 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 SGKNRKRTASSSSSGEEPDSE-----------------------EESRLKDLQERDEFASRLKKR 43
            |.|.:||....|...:|.|.|                       ||.|::|.:||:|....||.|
plant   121 SDKGKKRFRKKSGQSDESDGEVAVREDSRHVRRKVSEEDDGSESEEERVRDQKEREELEQHLKDR 185

  Fly    44 DDDRTRNVVDSTGGRRAIEEATKRLK-LEHEDRDKIVPHLRLQSRRQYLEKRKDDKVAELEADIL 107
            |..|||.:.:.|..::..|||.:|.. ||.:|    :..||..||::||:||:..|:.||..:|.
plant   186 DTARTRKLTEQTLSKKEKEEAVRRANALEKDD----LYSLRKVSRQEYLKKREQKKLDELRDEIE 246

  Fly   108 DDEYLFDESVLTKREKEEREYKKQLLNIAKEHEKARELERIQRYNMPQ--DLKKGERSE------ 164
            |::|||....||:.|..|..|||:|.::.|  ::.::.:.::.|.:|.  |.:.|...|      
plant   247 DEQYLFGGEKLTETELREFRYKKELYDLVK--KRTQDEDNVEEYRIPDAYDQEGGVDQEKRFSVA 309

  Fly   165 ---YVEVDEFEK-QPNSEQKKWEAEQLASARFHFGAKDAKAEEEYELLLDDQIDFIQALTLDGSR 225
               |.::|..|| .|.:||:.||..|:..|...||||:.:|.::|:.:.:|||:||:...:.|..
plant   310 VQRYRDLDSTEKMNPFAEQEAWEDHQIGKATLKFGAKNKQASDDYQFVFEDQINFIKESVMAGEN 374

  Fly   226 EK----SSSRQPELTEKERKRLTLDETRRSLPVYPFKEDLIAAVKEHQVLIIEGETGSGKTTQVP 286
            .:    :..:..:|.||.... .|.|.|||||:|.:::.|:.||:|||||:|.|:||||||||:|
plant   375 YEDAMDAKQKSQDLAEKTALE-ELQEVRRSLPIYTYRDQLLKAVEEHQVLVIVGDTGSGKTTQIP 438

  Fly   287 QYLVEAGFTKDKKMIGCTQPRRVAAMSVAARVAEEMGVKLGNEVGYSIRFEDCTSDRTILKYMTD 351
            |||.|||:||..| :||||||||||||||||||:|||||||:||||||||||||||:|:||||||
plant   439 QYLHEAGYTKRGK-VGCTQPRRVAAMSVAARVAQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTD 502

  Fly   352 GTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIARFRPELKLLISSATLDAEKFSAF 416
            |.|.||.|.|||||||||:|:||||||||.||||||||||||||||:|||||||||:||||||.:
plant   503 GMLLRELLGEPDLASYSVVIVDEAHERTLSTDILFGLVKDIARFRPDLKLLISSATMDAEKFSDY 567

  Fly   417 FDDAPIFRIPGRRYPVDIFYTKAPEADYIDACCVSVLQIHATQPLGDILVFLTGQDEIETCQEVL 481
            ||.||||..|||||||:|.||.||||||:||..|::|.||..:||||||||.|||:||||.:|:|
plant   568 FDTAPIFSFPGRRYPVEINYTSAPEADYMDAAIVTILTIHVREPLGDILVFFTGQEEIETAEEIL 632

  Fly   482 HDRVKRLGSKIRELIVIPVYANLPSDMQAKIFEPTPPNARKVILATNIAETSLTIDNIIYVIDPG 546
            ..|::.||:||||||:.|:||||||::|||||||||..||||:|||||||||||||.|.||:|||
plant   633 KHRIRGLGTKIRELIICPIYANLPSELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVVDPG 697

  Fly   547 FAKQNNFNSRTGMESLMVVPISKASANQRAGRAGRTAPGKCFRLYTAWAYKHELEDNTVPEIQRI 611
            |:|..::|.|||||||::.|||||||.|||||||||:||||:|||||:.|.::||:|||||:||.
plant   698 FSKMKSYNPRTGMESLLITPISKASATQRAGRAGRTSPGKCYRLYTAFNYNNDLEENTVPEVQRT 762

  Fly   612 NLGNAVLMLKALGINDLIHFDFLDPPPHETLVLALEQLYALGALNHHGELTKLGRRMAEFPVDPM 676
            ||.:.||.||:|||:|||:|||:||||.|.||.:||.|:||||||..|||||.||||||||:|||
plant   763 NLASVVLALKSLGIHDLINFDFMDPPPAEALVKSLELLFALGALNKLGELTKAGRRMAEFPLDPM 827

  Fly   677 MGKMLLASEKYKCSEEMVTIAAMLSVNSAIFYRPKDKIIHADTARKNFNHMH-GDHLSLLQVYNQ 740
            :.||::.|:|||||:|:::||||||:..:||||||||.:|||.||.||:..: |||::||:||:.
plant   828 LSKMIVVSDKYKCSDEIISIAAMLSIGGSIFYRPKDKQVHADNARMNFHTGNVGDHIALLKVYSS 892

  Fly   741 WAETDYSTQWCYENFIQYRSMKRARDVREQLVGLMQRVEIDMVSCLPETVNVRKAATAGYFYHVA 805
            |.||::||||||||:||.||||||||:|:||.||::|||||:.|.|.|..:|||:..||:|.|.|
plant   893 WKETNFSTQWCYENYIQVRSMKRARDIRDQLEGLLERVEIDISSNLNELDSVRKSIVAGFFPHTA 957

  Fly   806 RLSKGGHYKTIKHNQTVMIHPNSSLFEELPRWVLYHELVFTSKEYMRQVIEIESKWLLEVAPHYY 870
            :|.|.|.|:|:||.|||.|||||.|.:.|||||:|||||.|||||||||.|::.:||:|:|||||
plant   958 KLQKNGSYRTVKHPQTVHIHPNSGLSQVLPRWVVYHELVLTSKEYMRQVTELKPEWLIELAPHYY 1022

  Fly   871 KAKELEDSTNKKMPKVAGRAEM 892
            :.|::||:.:|||||.||:|.|
plant  1023 QLKDVEDAASKKMPKGAGKAAM 1044

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
l(2)37CbNP_609946.1 HrpA 222..867 CDD:224557 443/649 (68%)
DEXDc 269..408 CDD:238005 116/138 (84%)
HELICc 491..581 CDD:197757 68/89 (76%)
HA2 651..735 CDD:214852 55/84 (65%)
OB_NTP_bind 770..869 CDD:285018 61/98 (62%)
ESP3NP_174527.2 HrpA 365..1034 CDD:224557 452/670 (67%)
DEXDc 421..559 CDD:238005 116/138 (84%)
HELICc 630..732 CDD:197757 73/101 (72%)
HA2 802..887 CDD:214852 55/84 (65%)
OB_NTP_bind 911..1021 CDD:285018 70/109 (64%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 440 1.000 Domainoid score I102
eggNOG 1 0.900 - - E1_COG1643
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H2658
Inparanoid 1 1.050 1059 1.000 Inparanoid score I36
OMA 1 1.010 - - QHG53574
OrthoDB 1 1.010 - - D354219at2759
OrthoFinder 1 1.000 - - FOG0000059
OrthoInspector 1 1.000 - - otm2814
orthoMCL 1 0.900 - - OOG6_100085
Panther 1 1.100 - - LDO PTHR18934
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X141
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1413.840

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