DRSC/TRiP Functional Genomics Resources

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Protein Alignment l(2)37Cb and AT1G26370

DIOPT Version :9

Sequence 1:NP_609946.1 Gene:l(2)37Cb / 35192 FlyBaseID:FBgn0086444 Length:894 Species:Drosophila melanogaster
Sequence 2:NP_173961.3 Gene:AT1G26370 / 839179 AraportID:AT1G26370 Length:717 Species:Arabidopsis thaliana


Alignment Length:689 Identity:303/689 - (43%)
Similarity:434/689 - (62%) Gaps:58/689 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly   242 RLTLDETRRSLPVYPFKEDLIAAVKEHQVLIIEGETGSGKTTQVPQYLVEAGFTKDKKMIGCTQP 306
            |..:.|.|||||:...::.|:..|:::.:|||.||||||||||:||:|..|||.::.||||.|||
plant    31 RQKIAEHRRSLPIASVEKRLVEEVQKNDILIIVGETGSGKTTQLPQFLYNAGFCREGKMIGITQP 95

  Fly   307 RRVAAMSVAARVAEEMGVKLGNEVGYSIRFEDCTSDRTILKYMTDGTLHREFLSEPDLASYSVMI 371
            ||:||::||.|||||..|:||.:|||||||:|.||..|.|||||||.|.||.|.:|.|:.|||:|
plant    96 RRIAAVTVAKRVAEECEVQLGQKVGYSIRFDDTTSGSTRLKYMTDGLLLREALLDPHLSRYSVII 160

  Fly   372 IDEAHERTLHTDILFGLVKDIARFRPE-------------------------------------- 398
            :||||:|::|||:|..|:|.|.|.|.:                                      
plant   161 VDEAHDRSVHTDVLLALLKKIQRTRSQPVSEKTEFGNVASQVQTTTRDANGPQQNGVLKGYQGRK 225

  Fly   399 ---LKLLISSATLDAEKFSAFFDDAPIFRIPGRRYPVDIFYTKAPEADYIDACCVSVLQIHATQP 460
               |||:|.||:|||..||.:|..|....:.||::||||.||..||:||:||..|::.|||..:.
plant   226 LSPLKLIIMSASLDARVFSEYFGGAKAVHVQGRQFPVDILYTVHPESDYVDATLVTIFQIHFEEK 290

  Fly   461 LGDILVFLTGQDEIETCQEVLHDRVKRLGSKIRELIVIPVYANLPSDMQAKIFEPTPPNARKVIL 525
            .||||||||||||||:.:.::.:|::.:....|:|:.:.:::.|||:.|.|:|.|.|...|||||
plant   291 PGDILVFLTGQDEIESVERLVQERLQNIPEDKRKLLPLAIFSALPSEQQMKVFAPAPTGFRKVIL 355

  Fly   526 ATNIAETSLTIDNIIYVIDPGFAKQNNFNSRTGMESLMVVPISKASANQRAGRAGRTAPGKCFRL 590
            ||||||||:||..|.|||||||.|..:::...|||||.|||.|||...||:|||||..|||.|||
plant   356 ATNIAETSITIPGIRYVIDPGFVKARSYDPSKGMESLDVVPASKAQTLQRSGRAGREGPGKSFRL 420

  Fly   591 YTAWAYKHELEDNTVPEIQRINLGNAVLMLKALGINDLIHFDFLDPPPHETLVLALEQLYALGAL 655
            |....:: :|||:|.|||:|.||.|.:|.||||||:|::.|||:|.|....::.||.:|::||||
plant   421 YPEREFE-KLEDSTKPEIKRCNLSNIILQLKALGIDDIVGFDFIDKPSRGAIIKALAELHSLGAL 484

  Fly   656 NHHGEL-TKLGRRMAEFPVDPMMGKMLLASEKYKCSEEMVTIAAMLSVNSAIFYRPKDKIIHADT 719
            ...|:| ..:|.:|:..|::|:..|.|:.:.::.|.|||:...|:|||.| |||.|::|...|.|
plant   485 ADDGKLENPVGYQMSRLPLEPVYSKALILANQFNCLEEMLITVAVLSVES-IFYDPREKREEART 548

  Fly   720 ARKNFNHMHGDHLSLLQVYNQWAE--------------TDYSTQWCYENFIQYRSMKRARDVREQ 770
            ::.:|..:.||||:.|.||.:..|              .....:||.||::..||:|.|||:..|
plant   549 SKNHFASVEGDHLTYLSVYRESDEFLEKRKAAGSGNNIDKIMKKWCKENYVNSRSLKHARDIYRQ 613

  Fly   771 LVGLMQRVEIDMVSCLPETVNVRKAATAGYFYHVARLSKGGHYKTIKHNQTVMIHPNSSLFEELP 835
            :...::::..::.||..:.:..|:...|.:|...|:....|.|:.::..:.|.|||.|.||...|
plant   614 IREHVEQIGFNVSSCGNDMLAFRRCLAASFFLKAAQRQLDGTYRALESGEVVHIHPTSVLFRAKP 678

  Fly   836 RWVLYHELVFTSKEYMRQVIEIESKWLLEVAPHYYKAKE 874
            ..|:::||:.|||:|::.:..|:|.||.|:|||:::..|
plant   679 ECVIFNELMQTSKKYIKNLTIIDSLWLSELAPHHFQTAE 717

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
l(2)37CbNP_609946.1 HrpA 222..867 CDD:224557 299/680 (44%)
DEXDc 269..408 CDD:238005 88/179 (49%)
HELICc 491..581 CDD:197757 50/89 (56%)
HA2 651..735 CDD:214852 33/84 (39%)
OB_NTP_bind 770..869 CDD:285018 31/98 (32%)
AT1G26370NP_173961.3 HrpA 31..714 CDD:224557 302/684 (44%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1643
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53574
OrthoDB 1 1.010 - - D354219at2759
OrthoFinder 1 1.000 - - FOG0000059
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100085
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
65.730

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