DRSC/TRiP Functional Genomics Resources

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Protein Alignment l(2)37Cb and AT5G10370

DIOPT Version :10

Sequence 1:NP_609946.1 Gene:l(2)37Cb / 35192 FlyBaseID:FBgn0086444 Length:894 Species:Drosophila melanogaster
Sequence 2:NP_196599.2 Gene:AT5G10370 / 830901 AraportID:AT5G10370 Length:1775 Species:Arabidopsis thaliana


Alignment Length:886 Identity:274/886 - (30%)
Similarity:452/886 - (51%) Gaps:143/886 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    67 RLKLEHEDRDKIVPHLRLQSRRQYLEKRKDDKVAELEADILDDEYLFDESVLTKREKEEREYKKQ 131
            ||:.:||...:::|::.:.|....|:.|..|              ||...:|:..|..|...|.:
plant   154 RLQGKHEFVPELIPNVIVPSDMNELKDRLRD--------------LFSSHILSLMENGEGVKKVR 204

  Fly   132 LLNIAKEHEKARELERIQRYNMPQDLKKGERSEYVEVDEFEKQPNSEQKKWEAEQ---------- 186
            |           |:|...|..:....|:|     ::.:.|||     :|..|||:          
plant   205 L-----------EIEEKSRQVVSFSSKRG-----LKFEVFEK-----KKAIEAERDLVVNRLEEF 248

  Fly   187 ----LASARFHFGAKDAKAEEEYELLLDDQID-FIQALTLDGSREKSSSRQPELTEKERKRLTLD 246
                .:..|:..|      ::.||..|||:.: .:....|:|:.:  ..|...|..:|.:||   
plant   249 NNAMKSILRYLIG------QDGYEFDLDDEEEGDVAVFCLEGAYD--WRRIHCLIRRECRRL--- 302

  Fly   247 ETRRSLPVYPFKEDLIAAVKEHQVLIIEGETGSGKTTQVPQYLVEAGFTKDKKMIGCTQPRRVAA 311
              ...||:|.::..::..:...|::::.|||||||:||:.|:|.::|....:.:: |||||::||
plant   303 --EDGLPIYAYRRQILKKIHREQIMVLIGETGSGKSTQLVQFLADSGVAASESIV-CTQPRKIAA 364

  Fly   312 MSVAARVAEE-MGVKLGNEVGYSIRFEDCTSDRTILKYMTDGTLHREFLSEPDLASYSVMIIDEA 375
            |::|.||.|| .|....|.|..:..|.......:.:.||||..|.:.::.:..|:..|.:|||||
plant   365 MTLADRVREESSGCYEENTVSCTPTFSSTEEISSKVVYMTDNCLLQHYMKDRSLSGISCVIIDEA 429

  Fly   376 HERTLHTDILFGLVKDIARFRPELKLLISSATLDAEKFSAFFDDAPIFRIPGRRYPVDIFYTKAP 440
            |||:|:||:|..|:|.:...|.:|:|:|.|||.||::.|.:|....|..:.||.:||:|.|:.:.
plant   430 HERSLNTDLLLALLKKLLSRRIDLRLVIMSATADAKQLSQYFFSCGILLVNGRNFPVEIVYSPSD 494

  Fly   441 E---------ADYIDACCVSVLQIHATQPLGDILVFLTGQDEIE-TCQEVLHDRVKRLGSKIREL 495
            .         |.|:.......::||.|:..|.||.|||.|.|:| .|:..:          ....
plant   495 TEENSVVGGIASYVGDVVKMAVEIHKTEKEGTILAFLTSQAEVEWACERFI----------TPSA 549

  Fly   496 IVIPVYANLPSDMQAKIFEPTPPNARKVILATNIAETSLTIDNIIYVIDPGFAKQNNFNSRTGME 560
            |.:|::..|..:.|.::|: ..|..||||.|||||||||||..:.||||.|..|::.:..||||.
plant   550 IALPLHGKLSFEEQFRVFQ-NHPGRRKVIFATNIAETSLTIPGVKYVIDSGMVKESKYEPRTGMS 613

  Fly   561 SLMVVPISKASANQRAGRAGRTAPGKCFRLYTAWAYKHELED---NTVPEIQRINLGNAVLMLKA 622
            .|.|..:|::||.|||||||||.||:|:|||:    |::.:.   |..|||:|::||.|:|.:.|
plant   614 ILKVCRVSQSSARQRAGRAGRTEPGRCYRLYS----KNDFDSMNLNQEPEIRRVHLGVALLRMLA 674

  Fly   623 LGINDLIHFDFLDPPPHETLVLALEQLYALGAL---NHHGELTKLGRRMAEFPVDPMMGKMLLAS 684
            ||:|::..|:|:|.|..|.:.:|::.|..|||:   |...|||:.|..:.:..::|.:||::|..
plant   675 LGVNNIAEFNFVDAPVPEAIAMAVQNLVQLGAVVEKNGVHELTQEGHCLVKLGLEPKLGKLILGC 739

  Fly   685 EKYKCSEEMVTIAAMLSVNSAIFYRPK--DKIIHADTARKNFNHMHGDHLSLLQVYNQWAE--TD 745
            .:::..:|.:.:||:::..|:||.|..  |..:.||..:..|.:.:||..:||.||.:||.  .:
plant   740 FRHRMGKEGIVLAAVMANASSIFCRVGNFDDKMKADRLKVQFCNQNGDLFTLLSVYKEWASLPRE 804

  Fly   746 YSTQWCYENFIQYRSMKRARDVREQLVGLMQRVEIDMVS------------------------CL 786
            ...:||:||.:..:||:|..|..::|...::| |:.:||                        .|
plant   805 RRNKWCWENSLNAKSMRRCEDTVKELEICIER-ELTLVSPSYWVWNPNEGTKHDKHLKMVILASL 868

  Fly   787 PETVNVRKAATAGYFYHVARLSKGGHYKTIKHNQTVMIHPNSSL--FEELPRWVLYHELVFTSKE 849
            .|.|    |...||       ::.| |:.....|.|.:||:.||  |.:.|.||::.||:....:
plant   869 AENV----AMYTGY-------NQLG-YEVALTGQQVQLHPSCSLLAFGQKPSWVVFGELLSIVDQ 921

  Fly   850 YMRQV--IEIESKWLLEVAPHYYKAKELEDSTNKKMPKVAG 888
            |:..|  .:.|:.::|:..|.:..::  .|....::.||.|
plant   922 YLVCVTACDFEALYMLDPPPPFDVSQ--MDERRLRIKKVVG 960

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
l(2)37CbNP_609946.1 PTZ00121 <6..267 CDD:173412 45/214 (21%)
HrpA 251..>868 CDD:441249 227/665 (34%)
AT5G10370NP_196599.2 HrpA 304..>756 CDD:441249 174/467 (37%)
OB_NTP_bind 860..937 CDD:400182 23/88 (26%)
RING_Ubox 1561..>1591 CDD:473075
BRcat_RBR 1646..1699 CDD:438996
Rcat_RBR_DEAH12-like 1718..1768 CDD:439036
Blue background indicates that the domain is not in the aligned region.

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