DRSC/TRiP Functional Genomics Resources

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Protein Alignment l(2)37Cb and AT4G18465

DIOPT Version :9

Sequence 1:NP_609946.1 Gene:l(2)37Cb / 35192 FlyBaseID:FBgn0086444 Length:894 Species:Drosophila melanogaster
Sequence 2:NP_567558.2 Gene:AT4G18465 / 827579 AraportID:AT4G18465 Length:695 Species:Arabidopsis thaliana


Alignment Length:652 Identity:309/652 - (47%)
Similarity:435/652 - (66%) Gaps:24/652 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly   245 LDETRRSLPVYPFKEDLIAAVKEHQVLIIEGETGSGKTTQVPQYLVEAGFTKDKKMIGCTQPRRV 309
            :::.|:.||||.::.:::..|:.|...||.||||||||||:||||.|||:.:..::|.||||||:
plant    41 IEKQRQRLPVYKYRTEILYLVENHATTIIVGETGSGKTTQIPQYLKEAGWAEGGRVIACTQPRRL 105

  Fly   310 AAMSVAARVAEEMGVKLGNEVGYSIRFED-CTSDRTILKYMTDGTLHREFLSEPDLASYSVMIID 373
            |..:|:|||||||||.||.||||:||||| .||..|.:|::|||.|.||.:.:|.|..|||::||
plant   106 AVQAVSARVAEEMGVNLGEEVGYTIRFEDHTTSGVTSVKFLTDGVLIREMMEDPLLTKYSVIMID 170

  Fly   374 EAHERTLHTDILFGLVKDIARFRPELKLLISSATLDAEKFSAFFDD-----AP------------ 421
            |||||::.||||.||:|.|.|.||||:|:|||||::|:..|.||:.     ||            
plant   171 EAHERSISTDILLGLLKKIQRRRPELRLIISSATIEAKTMSNFFNSSKKRHAPEGSTPGPKLEPA 235

  Fly   422 IFRIPGRRYPVDIFYTKAPEADYIDACCVSVLQIHATQPLGDILVFLTGQDEIETCQEVLHDRVK 486
            |..:.||.:.|.|.|.:.|.:|||.:...::|.|:..:|.||:|||||||::|||..::|.:...
plant   236 ILSVEGRGFSVKIHYVEEPVSDYIRSVVSTILLINEREPPGDVLVFLTGQEDIETAIKLLEEEAH 300

  Fly   487 RLGSKIRELIVIPVYANLPSDMQAKIFEPTPPNARKVILATNIAETSLTIDNIIYVIDPGFAKQN 551
            ........|:.:|:|:.|....|..||.|||...|||||:|||||||||::.::||||.||:||.
plant   301 SNQKNSSGLLPLPLYSGLSRSEQELIFTPTPRGKRKVILSTNIAETSLTLEGVVYVIDSGFSKQK 365

  Fly   552 NFNSRTGMESLMVVPISKASANQRAGRAGRTAPGKCFRLYTAWAYKHELEDNTVPEIQRINLGNA 616
            .:|..:.:|||:|.|||||||.||:|||||..||||:||||...:.:::....:||:||.||.:.
plant   366 FYNPISDIESLVVAPISKASARQRSGRAGRVRPGKCYRLYTEDYFLNQMPGEGIPEMQRSNLVST 430

  Fly   617 VLMLKALGINDLIHFDFLDPPPHETLVLALEQLYALGALNHHGELTK-LGRRMAEFPVDPMMGKM 680
            |:.||||||::::.||:..||..|.::.|||.||:|..|:...:||. .|.::||.|:|||:.||
plant   431 VIQLKALGIDNILGFDWPAPPSSEAMIRALEVLYSLQILDDDAKLTSPTGFQVAELPLDPMISKM 495

  Fly   681 LLASEKYKCSEEMVTIAAMLSVNSA-IFYRPKDKIIHADTARKNFNHMHGDHLSLLQVYNQWAET 744
            :|||.:..||.|::||||:|||.|. |..|...|  ..|.|:..|....|||::.|.||..:.|:
plant   496 ILASSELGCSHEIITIAAVLSVQSVWIIARGVQK--EQDEAKLRFAAAEGDHVTFLNVYKGFLES 558

  Fly   745 DYSTQWCYENFIQYRSMKRARDVREQLVGLMQRVEIDMVSCLPETVNVRKAATAGYFYHVARLS- 808
            ...|||||:||:.|:|||:..::|:||..:.:|:.|.:.||..:...||||.|||:|.:..||. 
plant   559 KKPTQWCYKNFLNYQSMKKVVEIRDQLKRIARRLGITLKSCDGDMEAVRKAVTAGFFANACRLEP 623

  Fly   809 -KGGHYKTIKHNQTVMIHPNSSLFEELPRWVLYHELVFTSKEYMRQVIEIESKWLLEVAPHYYKA 872
             ..|.||||:.::.|.|||:|.||...|:||:|..:|.|.::|||.|:.|...||.|||||:|:.
plant   624 HSNGVYKTIRGSEEVYIHPSSVLFRVNPKWVVYQSIVSTERQYMRNVVTINPSWLTEVAPHFYQN 688

  Fly   873 KE 874
            ::
plant   689 RQ 690

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
l(2)37CbNP_609946.1 HrpA 222..867 CDD:224557 305/643 (47%)
DEXDc 269..408 CDD:238005 88/139 (63%)
HELICc 491..581 CDD:197757 49/89 (55%)
HA2 651..735 CDD:214852 36/85 (42%)
OB_NTP_bind 770..869 CDD:285018 45/100 (45%)
AT4G18465NP_567558.2 HrpA 41..683 CDD:224557 305/643 (47%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1643
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53574
OrthoDB 1 1.010 - - D354219at2759
OrthoFinder 1 1.000 - - FOG0000059
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100085
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
65.730

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