DRSC/TRiP Functional Genomics Resources

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Protein Alignment l(2)37Cb and AT4G16680

DIOPT Version :9

Sequence 1:NP_609946.1 Gene:l(2)37Cb / 35192 FlyBaseID:FBgn0086444 Length:894 Species:Drosophila melanogaster
Sequence 2:NP_001329688.1 Gene:AT4G16680 / 827370 AraportID:AT4G16680 Length:796 Species:Arabidopsis thaliana


Alignment Length:786 Identity:430/786 - (54%)
Similarity:563/786 - (71%) Gaps:47/786 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly   121 REKEEREYKKQLLNIAKEHEKARELERIQRYNMPQ--------DLKKGERSEYVEVDEFEKQPN- 176
            ||..|..||:.|..:.|   |..:.:.::.|..|.        |.||  |.:..:....|::.: 
plant     2 REVIEFRYKRALYELVK---KTEDDDDVEGYRFPDAYDQEGCIDQKK--RFDVAKERYCERRRSG 61

  Fly   177 ---SEQKKWEAEQLASARFHFGAKDAK-AEEEYELLLDDQIDFIQALTLDGSREKSSSRQP---- 233
               :||:.||..|...||..|||||.| ..:.||.:.||...|:         |:||..:.    
plant    62 RVVTEQEAWEDHQAQKARVRFGAKDKKQVVDGYEFVFDDLTGFV---------EESSEAETGKHR 117

  Fly   234 ---ELTEKERKRLTLDETRRSLPVYPFKEDLIAAVKEHQVLIIEGETGSGKTTQVPQYLVEAGFT 295
               ..|..|:.|    |.|..||::.::|:|:..::|:|||:|.||||||||||:||||.|||:|
plant   118 GCYSKTAAEKAR----EGREFLPIHGYREELLKLIEENQVLVIVGETGSGKTTQIPQYLQEAGYT 178

  Fly   296 KDKKMIGCTQPRRVAAMSVAARVAEEMGVKLGNEVGYSIRFEDCTSDRTILKYMTDGTLHREFLS 360
            |..| |||||||||||||||:|||:|:|||||:|||||||||||||::|::||||||.|.||.|.
plant   179 KRGK-IGCTQPRRVAAMSVASRVAQEVGVKLGHEVGYSIRFEDCTSEKTVIKYMTDGMLLRELLI 242

  Fly   361 EPDLASYSVMIIDEAHERTLHTDILFGLVKDIARFRPELKLLISSATLDAEKFSAFFDDAPIFRI 425
            ||.|.||||:||||||||||.|||||.||||:|:.||:|:|:||||||:|:|||.:||.|.|:.|
plant   243 EPKLDSYSVIIIDEAHERTLSTDILFALVKDVAKVRPDLRLIISSATLEAKKFSEYFDSARIYLI 307

  Fly   426 PGRRYPVDIFYTKAPEADYIDACCVSVLQIHATQPLGDILVFLTGQDEIETCQEVLHDRVKRLGS 490
            |||||||:..:.|.||.||::....:|:|||.|:.:||||||||||:||||.:..|..|:..||:
plant   308 PGRRYPVEKLFRKCPEPDYLETVIRTVVQIHQTEAIGDILVFLTGQEEIETVETNLKRRMMDLGT 372

  Fly   491 KIRELIVIPVYANLPSDMQAKIFEPTPPNARKVILATNIAETSLTIDNIIYVIDPGFAKQNNFNS 555
            |..|:|:.|:|:|||:.:|||:|||.|...|||:|||||||||||||.:.||||||:.|.|::|.
plant   373 KGSEIIICPIYSNLPTPLQAKVFEPAPKGTRKVVLATNIAETSLTIDGVKYVIDPGYCKINSYNP 437

  Fly   556 RTGMESLMVVPISKASANQRAGRAGRTAPGKCFRLYTAWAYKHELEDNTVPEIQRINLGNAVLML 620
            |||||||:|.|||||||.|||||:|||.||||||||..    .:||..|:|||||.||.:.||.|
plant   438 RTGMESLLVTPISKASAAQRAGRSGRTGPGKCFRLYNI----KDLEPTTIPEIQRANLASVVLTL 498

  Fly   621 KALGINDLIHFDFLDPPPHETLVLALEQLYALGALNHHGELTKLGRRMAEFPVDPMMGKMLLASE 685
            |:|||.|:.:|||:||||...|:.|||.|||||||:..||:||:|.||.|||||||:.||::.||
plant   499 KSLGIQDVFNFDFMDPPPENALLKALELLYALGALDEIGEITKVGERMVEFPVDPMLSKMIVGSE 563

  Fly   686 KYKCSEEMVTIAAMLSVNSAIFYRPKDKIIHADTARKNF---NHMHGDHLSLLQVYNQWAETDYS 747
            |||||:|::||||||||.:::|||||::.:.||.||.:|   ....|||::||:|||.|.|.:||
plant   564 KYKCSKEIITIAAMLSVGNSVFYRPKNQQVFADKARMDFYEDTENVGDHIALLRVYNSWKEENYS 628

  Fly   748 TQWCYENFIQYRSMKRARDVREQLVGLMQRVEIDMVSCLPETVNVRKAATAGYFYHVARLSKGGH 812
            ||||.|.|||.:|||||||:|:||:||:.::.:::.|...:...::||..||:|.|.|:|.|.|.
plant   629 TQWCCEKFIQSKSMKRARDIRDQLLGLLNKIGVELTSNPNDLDAIKKAILAGFFPHSAKLQKNGS 693

  Fly   813 YKTIKHNQTVMIHPNSSLFEELP-RWVLYHELVFTSKEYMRQVIEIESKWLLEVAPHYYKAKELE 876
            |:.:|..|||.:||||.||...| :|::|||||.|:|||||...|::.:||:|:||||||.|::|
plant   694 YRRVKEPQTVYVHPNSGLFGASPSKWLVYHELVLTTKEYMRHTTEMKPEWLIEIAPHYYKLKDIE 758

  Fly   877 DSTNKK 882
            |:..||
plant   759 DTRPKK 764

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
l(2)37CbNP_609946.1 HrpA 222..867 CDD:224557 386/655 (59%)
DEXDc 269..408 CDD:238005 107/138 (78%)
HELICc 491..581 CDD:197757 60/89 (67%)
HA2 651..735 CDD:214852 50/86 (58%)
OB_NTP_bind 770..869 CDD:285018 45/99 (45%)
AT4G16680NP_001329688.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 116 1.000 Domainoid score I1970
eggNOG 1 0.900 - - E1_COG1643
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53574
OrthoDB 1 1.010 - - D354219at2759
OrthoFinder 1 1.000 - - FOG0000059
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100085
Panther 1 1.100 - - O PTHR18934
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X141
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
109.790

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