DRSC/TRiP Functional Genomics Resources

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Protein Alignment l(2)37Cb and AT2G47680

DIOPT Version :10

Sequence 1:NP_609946.1 Gene:l(2)37Cb / 35192 FlyBaseID:FBgn0086444 Length:894 Species:Drosophila melanogaster
Sequence 2:NP_182290.1 Gene:AT2G47680 / 819381 AraportID:AT2G47680 Length:1015 Species:Arabidopsis thaliana


Alignment Length:708 Identity:181/708 - (25%)
Similarity:303/708 - (42%) Gaps:136/708 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   251 SLPVYPFKEDLIAAVKEHQVLIIEGETGSGKTTQVPQYLVEAGFTKDKKMIGCTQPRRVAAMSVA 315
            |||:...|..:|..:.|::|.:|.||.|.||::||||:|:||....    |.||||||.|.::||
plant    25 SLPIMAMKRRIIDKILENRVTLIVGEPGCGKSSQVPQFLLEANMAP----ILCTQPRRFAVVAVA 85

  Fly   316 ARVAEEMGVKLGNEVGYSIRFEDCTSDRTILKYMTDGTLHREFLSEP-DLASYSVMIIDEAHERT 379
            ..||:.....||.|:||.|......::.:.:.:.|.|.|..|.|.:. :...|.|:|:||.|||:
plant    86 KMVAKSRNSDLGGEIGYHIGHSKILTEGSKILFKTAGVLLDEMLDKGLNALKYKVIILDEVHERS 150

  Fly   380 LHTDILFGLVKDIARFRPELKLLISSATLDAEKFSAFFDDAPIFRIPGRRYPVDIFYTKAPEADY 444
            :.:|::...||.......:|::::.|||.|..::..:|.:.      ||...|::....:|:...
plant   151 VESDLVLVCVKQFLMKNNDLRVVLMSATADITRYRDYFKEL------GRGERVEVVAIPSPDQRT 209

  Fly   445 IDACCVSVLQIHATQPLG---DILVFLTG------QDEIE-TCQEVLHDRVKRLGSKIRE----- 494
            |....|..|: .....||   |:..:..|      ..||: ..|.::||.:..:..|..:     
plant   210 IFQRRVLYLE-QVAGLLGVSSDLSAYCPGPSPSSADTEIKPELQNLIHDLILYIHEKEPDIEKSI 273

  Fly   495 LIVIPVYANLPSDMQAKIFEP------------------------TPPNARKVILATNIAETSLT 535
            |:.:|.|.:|  :.|....||                        ...:.|||||||||||:|:|
plant   274 LVFLPTYYSL--EQQYHQLEPFFASFEVHILHRSIDTEQALAAMKICRSRRKVILATNIAESSVT 336

  Fly   536 IDNIIYVIDPGFAKQNNFNSRTGMESLMVVPISKASANQRAGRAGRTAPGKCFRLYTAWAYKHEL 600
            |..:.||||...:.|..::.....:::.:|.:|::.|.||.||.|||..|:.:||..: |:.::|
plant   337 IPKVAYVIDSCRSLQVFWDPSRKRDAVQLVWVSRSQAEQRRGRTGRTCDGEVYRLVPS-AFFNKL 400

  Fly   601 EDNTVPEIQRINLGNAVLML---KALGIND--LIHFDFLDPPPHETLVLALEQLYALGALNH--- 657
            |::..|.|.:::|...||.:   ::..|||  .:....:|||..:.:..||..|.::.||..   
plant   401 EEHEPPSILKLSLRQQVLHICCTESRAINDANALLAKAMDPPDPDVVDDALRMLLSIQALRKSPR 465

  Fly   658 -HGELTKLGRRMAEFPVDPMMGKMLLASEKYKCSEEMVTIAAMLSVNSAIFYRPKDKIIHADTAR 721
             ..|.|..||.:|.||:            .:..|..:|....|..:...|...     :..||..
plant   466 GRYEPTFYGRLLASFPL------------SFDASILVVKFGEMGMLRQGILLG-----VLMDTLP 513

  Fly   722 KNFNHMHGDHLSLLQVYNQW-----------AETDYSTQWC--------------YENFIQYRSM 761
            ...:|..||....|:..:.:           .|......:|              .||..|..|.
plant   514 LPIHHPFGDDSLFLEYVDHYFGGSKTISGGRREMVLMANFCAFQFWQRVFKDKHRLENLKQLLSK 578

  Fly   762 KRARDVREQLVGLMQRVEIDMVSCLPETVNVRKAATAGYFYHVARLSKGGHYKTIKHNQTVMIHP 826
            ::.:|::      :...||:...|  :..|:.:::    ||||:.|          :..|:    
plant   579 EKDKDLK------LMFPEIEKEWC--DFHNIAQSS----FYHVSEL----------YEDTL---- 617

  Fly   827 NSSLFEELPRWVLYHELVFTSKEYMRQVIEIESKWLLEVAPHYYKAKELEDSTNKKMP 884
             ||.....|:::...:    |:.......|.:....:|..|...|....||..|.:.|
plant   618 -SSFHRFRPQFISSSD----SQPTYYNPYEFDHTCYIECQPSEDKYLHSEDVDNNQPP 670

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
l(2)37CbNP_609946.1 PTZ00121 <6..267 CDD:173412 5/15 (33%)
HrpA 251..>868 CDD:441249 175/690 (25%)
AT2G47680NP_182290.1 HrpA 24..>482 CDD:441249 141/470 (30%)
DEXHc_RHA-like 42..188 CDD:438707 53/149 (36%)
YTH1 624..>779 CDD:227416 10/51 (20%)

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