DRSC/TRiP Functional Genomics Resources

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Protein Alignment l(2)37Cb and AT2G47250

DIOPT Version :9

Sequence 1:NP_609946.1 Gene:l(2)37Cb / 35192 FlyBaseID:FBgn0086444 Length:894 Species:Drosophila melanogaster
Sequence 2:NP_182247.1 Gene:AT2G47250 / 819338 AraportID:AT2G47250 Length:729 Species:Arabidopsis thaliana


Alignment Length:690 Identity:350/690 - (50%)
Similarity:474/690 - (68%) Gaps:48/690 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly   229 SSRQPELTEKERKRLTLDETRRSLPVYPFKEDLIAAVKEHQVLIIEGETGSGKTTQVPQYLVEA- 292
            |.|..|:.||          ||.|||:..|:|.:..:..:|.||:.||||||||||:||::::| 
plant    52 SQRYFEILEK----------RRDLPVWLQKDDFLNTLNSNQTLILVGETGSGKTTQIPQFVLDAV 106

  Fly   293 ---GFTKDKK-MIGCTQPRRVAAMSVAARVAEEMGVKLGNEVGYSIRFEDCTSDRTILKYMTDGT 353
               ...|.:| ::|||||||||||||:.|||:||.|.:|.|||||||||||||.||:|||:|||.
plant   107 VADNSDKGRKWLVGCTQPRRVAAMSVSRRVADEMDVSIGEEVGYSIRFEDCTSSRTMLKYLTDGM 171

  Fly   354 LHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIARFRPELKLLISSATLDAEKFSAFFD 418
            |.||.:::|.|..|.|:|:||||||||.||:||||:|::.|.||:|||::.||||:||||..:|.
plant   172 LLREAMADPLLERYKVIILDEAHERTLATDVLFGLLKEVLRNRPDLKLVVMSATLEAEKFQEYFS 236

  Fly   419 DAPIFRIPGRRYPVDIFYTKAPEADYIDACCVSVLQIHATQPLGDILVFLTGQDEIETCQEVLHD 483
            .||:.::|||.:||:||||:.||.||::|...:|:|||..:|.|||||||||::|||.....::.
plant   237 GAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPPGDILVFLTGEEEIEDACRKINK 301

  Fly   484 RVKRLGSKIRELIVIPVYANLPSDMQAKIFEPTP-------PNARKVILATNIAETSLTIDNIIY 541
            .|..||.::..:.|:|:|:.||..||.|||:|.|       |..||::::|||||||||||.|:|
plant   302 EVSNLGDQVGPVKVVPLYSTLPPAMQQKIFDPAPVPLTEGGPAGRKIVVSTNIAETSLTIDGIVY 366

  Fly   542 VIDPGFAKQNNFNSRTGMESLMVVPISKASANQRAGRAGRTAPGKCFRLYTAWAYKHELEDNTVP 606
            |||||||||..:|.|..:|||:|.|||||||:||:||||||.|||||||||..::.::|:..|.|
plant   367 VIDPGFAKQKVYNPRIRVESLLVSPISKASAHQRSGRAGRTRPGKCFRLYTEKSFNNDLQPQTYP 431

  Fly   607 EIQRINLGNAVLMLKALGINDLIHFDFLDPPPHETLVLALEQLYALGALNHHGELTKLGRRMAEF 671
            ||.|.||.|.||.||.|||:||:||||:|||..|||:.|||.|..||||:..|.|||.|..|:||
plant   432 EILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYLGALDDEGNLTKTGEIMSEF 496

  Fly   672 PVDPMMGKMLLASEKYKCSEEMVTIAAMLSVNSAIFYRPKDKIIHADTARKNFNHMHGDHLSLLQ 736
            |:||.|.|||:.|.::.||.|:::::|||||.:. |.||::....||.|:..|.|:.||||:||.
plant   497 PLDPQMSKMLIVSPEFNCSNEILSVSAMLSVPNC-FVRPREAQKAADEAKARFGHIDGDHLTLLN 560

  Fly   737 VYNQWAETDYSTQWCYENFIQYRSMKRARDVREQLVGLMQRVEIDMVS----CLPETVNVRKAAT 797
            ||:.:.:.:....||:|||:..|:||.|.:||:|||.:|.|..:.|.|    .....||:|||..
plant   561 VYHAYKQNNEDPNWCFENFVNNRAMKSADNVRQQLVRIMSRFNLKMCSTDFNSRDYYVNIRKAML 625

  Fly   798 AGYFYHVARLSKGGHYKTIKHNQTVMIHPNSSLFEELPRWVLYHELVFTSKEYMRQVIEIESKWL 862
            ||||..||.|.:.|||.|:|.||.|.:||::.| :..|.||:|:|.|.|::.::|.|.:|..:||
plant   626 AGYFMQVAHLERTGHYLTVKDNQVVHLHPSNCL-DHKPEWVIYNEYVLTTRNFIRTVTDIRGEWL 689

  Fly   863 LEVAPHYY--------------------KAKELEDSTNKK 882
            ::||.|||                    :.:|..:|.|:|
plant   690 VDVAQHYYDLSNFPNCEAKRALEKLYKKREREKNESKNRK 729

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
l(2)37CbNP_609946.1 HrpA 222..867 CDD:224557 342/653 (52%)
DEXDc 269..408 CDD:238005 90/143 (63%)
HELICc 491..581 CDD:197757 55/96 (57%)
HA2 651..735 CDD:214852 40/83 (48%)
OB_NTP_bind 770..869 CDD:285018 44/102 (43%)
AT2G47250NP_182247.1 HrpA 40..711 CDD:224557 346/670 (52%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1643
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53574
OrthoDB 1 1.010 - - D354219at2759
OrthoFinder 1 1.000 - - FOG0000059
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100085
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X141
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
87.730

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