DRSC/TRiP Functional Genomics Resources

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Protein Alignment l(2)37Cb and dhx38

DIOPT Version :9

Sequence 1:NP_609946.1 Gene:l(2)37Cb / 35192 FlyBaseID:FBgn0086444 Length:894 Species:Drosophila melanogaster
Sequence 2:XP_002937626.2 Gene:dhx38 / 734019 XenbaseID:XB-GENE-990308 Length:1212 Species:Xenopus tropicalis


Alignment Length:982 Identity:390/982 - (39%)
Similarity:558/982 - (56%) Gaps:135/982 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 SGKNRKRTAS--SSSSGEEPD--------SEEESRLKDLQERDEFASRLKKRDDDRTRNVVDSTG 56
            |.:::.|.||  |.||.||.|        |:.||.......||...|...:|:..|...   |..
 Frog   181 SPRHKPRDASTPSRSSWEEDDSGYGSSQRSQWESPSPAPSNRDSEKSHRSERESSRRER---SER 242

  Fly    57 GRRAIEE--------------------ATKRLK----LEHEDRDKIVPHLRLQSRRQYLEKRKDD 97
            ||.:.|.                    :|.||.    .:..|.|||    ...|..:..:...|.
 Frog   243 GRYSEESPLPTPSYKYNEWASDRRHLGSTPRLSQGRGKQDSDDDKI----NFMSEEEQRQWEDDQ 303

  Fly    98 KVAELEADILDDEYLFDESVLTKREKEEREYKKQLLNIAKEHEKARELERI--QRYNMPQDLKKG 160
            :.|:.:..::|:.  ||||........|...||:...:.|:..|     |:  ||..:.:|.::.
 Frog   304 RQADRDWYMMDEG--FDESHNALTSTSEDYVKKREQQLQKQTSK-----RVSAQRRQINEDNERW 361

  Fly   161 ERS--------EYVEVDE---------------------------FEKQP--------------- 175
            |.:        :.:||||                           |.|||               
 Frog   362 ETNRMLTSGVVQRLEVDEDFEEDNAAKVHLLVHNLVPPFLDGRIVFTKQPEPVIPVRDATSDLAI 426

  Fly   176 -------------------NSEQKKWEAEQLASARFH--FGAKDAKAEEEYELLLDDQIDF-IQA 218
                               .::.|.||   ||..:..  .|.|....|.:..:..|..:|: .:.
 Frog   427 IARKGSQLVRKHREQKERKKAQHKHWE---LAGTKLGDIMGVKKQVDEPDKPIAEDGAVDYKAEQ 488

  Fly   219 LTLDGSREKSSSRQPELTEKERKRLTLDETRRSLPVYPFKEDLIAAVKEHQVLIIEGETGSGKTT 283
            ...|..||:|.:.    ::..||: :|.|.|:.||::..:::|:..::::.::|:.|||||||||
 Frog   489 KFADHMRERSEAS----SDFSRKK-SLMEQRQYLPIFAVQQELLTIIRDNSIVIVVGETGSGKTT 548

  Fly   284 QVPQYLVEAGFTKDKKMIGCTQPRRVAAMSVAARVAEEMGVKLGNEVGYSIRFEDCTSDRTILKY 348
            |:.|||.|.|:| |..||.|||||||||||||.||:|||.|.||.||||:||||||||::|::||
 Frog   549 QLTQYLHEDGYT-DYGMIACTQPRRVAAMSVAKRVSEEMQVSLGEEVGYAIRFEDCTSEKTLIKY 612

  Fly   349 MTDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIARFRPELKLLISSATLDAEKF 413
            ||||.|.||.|.|.||..||.:|:||||||:|:||:||||::::...|.:|||:::|||:||:||
 Frog   613 MTDGILLRECLREADLDHYSAVIMDEAHERSLNTDVLFGLLREVVTRRSDLKLIVTSATMDADKF 677

  Fly   414 SAFFDDAPIFRIPGRRYPVDIFYTKAPEADYIDACCVSVLQIHATQPLGDILVFLTGQDEIETCQ 478
            :.||.:.|||.||||.:||||.::|.|:.||::|.....||||.:...||||:|:.||::||...
 Frog   678 ATFFGNVPIFYIPGRTFPVDILFSKTPQEDYVEAAVKQALQIHLSGAAGDILIFMPGQEDIEVTS 742

  Fly   479 EVLHDRVKRLGSKIRELIVIPVYANLPSDMQAKIFEPTPPNARKVILATNIAETSLTIDNIIYVI 543
            :.:.:|::.|.| ...|.|:|:|:.||||:|||||:..|...||.|:||||||||||:|.|::||
 Frog   743 DQIVERLEELDS-APPLAVLPIYSQLPSDLQAKIFQKAPDGVRKCIVATNIAETSLTVDGIMFVI 806

  Fly   544 DPGFAKQNNFNSRTGMESLMVVPISKASANQRAGRAGRTAPGKCFRLYTAWAYKHELEDNTVPEI 608
            |.|:.|...||.|.||::|.:.|||:|:||||:||||||.||:|:||||..|||:||...|||||
 Frog   807 DSGYCKLKVFNPRIGMDALQIYPISQANANQRSGRAGRTGPGQCYRLYTQSAYKNELLHTTVPEI 871

  Fly   609 QRINLGNAVLMLKALGINDLIHFDFLDPPPHETLVLALEQLYALGALNHHGELTKLGRRMAEFPV 673
            ||.||.|.||:||:||:.||:.|.|:||||.:.::.::.||:.||||::.|.||..||.|.|||:
 Frog   872 QRTNLSNVVLLLKSLGVQDLLLFHFMDPPPEDNMLNSMYQLWILGALDNTGALTPTGRLMVEFPL 936

  Fly   674 DPMMGKMLLASEKYKCSEEMVTIAAMLSVNSAIFYRPKDKIIHADTARKNFNHMHGDHLSLLQVY 738
            ||.:.|||:.|....||.|::.:.:|||| .|||||||.:...:|..|:.|.....|||:.|.|:
 Frog   937 DPALSKMLIVSCDMGCSSEILIVVSMLSV-PAIFYRPKGREEESDQVREKFAVPESDHLTYLNVF 1000

  Fly   739 NQWAETDYSTQWCYENFIQYRSMKRARDVREQLVGLMQRVEIDMVSCLPETVNVRKAATAGYFYH 803
            .||...:||:.||.::||..::|::.|:||.||..:|....:.:.||..:...|||...|.||:.
 Frog  1001 LQWKNNNYSSGWCNQHFIHAKAMRKVREVRAQLKDIMVSQRMSLSSCGSDWDIVRKCICAAYFHQ 1065

  Fly   804 VARLSKGGHYKTIKHNQTVMIHPNSSLF--EELPRWVLYHELVFTSKEYMRQVIEIESKWLLEVA 866
            .|||...|.|..::......:||.||||  ...|.:::|||||.|:||||:.|..::.:||.|:.
 Frog  1066 AARLKGIGEYVNVRTGMPCHLHPTSSLFGMGYTPDYIVYHELVMTTKEYMQCVTAVDGEWLAELG 1130

  Fly   867 PHYYKAK 873
            |.:|..|
 Frog  1131 PMFYSIK 1137

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
l(2)37CbNP_609946.1 HrpA 222..867 CDD:224557 322/646 (50%)
DEXDc 269..408 CDD:238005 89/138 (64%)
HELICc 491..581 CDD:197757 51/89 (57%)
HA2 651..735 CDD:214852 39/83 (47%)
OB_NTP_bind 770..869 CDD:285018 38/100 (38%)
dhx38XP_002937626.2 HrpA 483..1131 CDD:224557 323/655 (49%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D113216at33208
OrthoFinder 1 1.000 - - FOG0000059
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X141
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.920

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