DRSC/TRiP Functional Genomics Resources

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Protein Alignment l(2)37Cb and Dhx34

DIOPT Version :10

Sequence 1:NP_609946.1 Gene:l(2)37Cb / 35192 FlyBaseID:FBgn0086444 Length:894 Species:Drosophila melanogaster
Sequence 2:NP_082159.3 Gene:Dhx34 / 71723 MGIID:1918973 Length:1145 Species:Mus musculus


Alignment Length:738 Identity:241/738 - (32%)
Similarity:373/738 - (50%) Gaps:88/738 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    72 HEDRDKIVPHLRLQSRRQYLEKRKDDKVAELEADILDDEYLFDESVLTKREKEEREYKKQLLNIA 136
            |.|||    |.| ..|.:...::.|....|... :|:|.:..||..:.:..:|.:::        
Mouse    12 HRDRD----HHR-APREEEAPEKWDWNCPETRC-LLEDVFFRDEDYIRRGSEECQKF-------- 62

  Fly   137 KEHEKARELERIQRYNMPQDLKKGERSEYVEVDEFEKQPNSEQKKWEAEQLASARFHFGAKDAKA 201
                 ....||:||:   |.||..::.        ||.|.  ..|.....||.....:       
Mouse    63 -----WAFFERLQRF---QHLKTSQKK--------EKDPG--MPKHGIAALADLPLTY------- 102

  Fly   202 EEEYELLLDDQIDFIQALTLDGSREKSSSRQPELTEKERKRL----------------TLDETRR 250
            :..|.:.|.     |.:....|.........||...:.|:.|                .|...|.
Mouse   103 DPRYRINLS-----ILSPDTRGRHGPGRGLPPERVSEFRRALLHYLDFQQKQAFGRLVKLQRERA 162

  Fly   251 SLPVYPFKEDLIAAVKEHQVLIIEGETGSGKTTQVPQYLVEAGFTKDKKMIGCTQPRRVAAMSVA 315
            :||:..:...::..:|||||:::.|:||.||:|||||||:.|||:.    :.||||||:|.:|:|
Mouse   163 ALPIAQYGNRILQTLKEHQVVVVAGDTGCGKSTQVPQYLLAAGFSH----VACTQPRRIACISLA 223

  Fly   316 ARVAEEMGVKLGNEVGYSIRFEDCTSDRTILKYMTDGTLHREFLSEPDLASYSVMIIDEAHERTL 380
            .||..|...:.|::|||.||||...|..|.:.::|.|.|.|:...||.|..|.|:|:||.|||.|
Mouse   224 KRVGFESLSQYGSQVGYQIRFESTRSAATKIVFLTVGLLLRQIQREPSLPQYQVLIVDEVHERHL 288

  Fly   381 HTDILFGLVKDIARFRPELKLLISSATLDAEKFSAFFDDAPIFRIPGRRYPVDIFYTKAPEADYI 445
            |.|.|.|:::.:...||:||:::.|||::...||::|..||:.::|||.:|:.:.| :..|||..
Mouse   289 HNDFLLGVLQRLLPQRPDLKVILMSATINISLFSSYFSHAPVVQVPGRLFPITVVY-QPQEADQT 352

  Fly   446 DACC--------VSVLQI----HATQPLGDILVFLTGQDEIETCQEVLHDRVKRLGSKIRELIVI 498
            .:..        :.||:.    :..:..||:||||:|..||.|   || |..:...|..:..:|:
Mouse   353 ASKSEKLDPRPFLRVLEAIDNKYPPEERGDLLVFLSGMAEITT---VL-DAAQAYASLTQRWVVL 413

  Fly   499 PVYANLPSDMQAKIFEPTPPNARKVILATNIAETSLTIDNIIYVIDPGFAKQNNFNSRTGMESLM 563
            |:::.|....|.|:|:..|...||.||:|||||||:|||.|.:|:|.|..|:.:::.:..::.|.
Mouse   414 PLHSALSVSDQDKVFDVAPAGVRKCILSTNIAETSVTIDGIRFVVDSGKVKEMSYDPQAKLQRLQ 478

  Fly   564 VVPISKASANQRAGRAGRTAPGKCFRLYTAWAYKHELEDNTVPEIQRINLGNAVLMLKALGINDL 628
            ...||:|||.||.||||||.||.|:|||....| .......||||:|:.|...||.:|::.:.|.
Mouse   479 EFWISQASAEQRKGRAGRTGPGVCYRLYAESDY-DAFAPYPVPEIRRVALDALVLQMKSMSVGDP 542

  Fly   629 IHFDFLDPPPHETLVLALEQLYALGALNHHGELTKLGRRMAEFPVDPMMGKMLLASEKYKCSEEM 693
            ..|.|::|||..::..|:..|...|||:....||.:|..:|:.|||.::||||:....:..:|.:
Mouse   543 RTFPFIEPPPPASVETAILYLQEQGALDSSEALTPIGSLLAQLPVDVVIGKMLILGSMFSLAEPV 607

  Fly   694 VTIAAMLSVNSAIFYRPKDKIIHADTARKNFNHMHGDHLSLLQVYNQWAE-----TDYSTQWCYE 753
            :||||.|||.|. |.|.....:...|||:......||..:|..|:|.|.:     :..|.:||..
Mouse   608 LTIAAALSVQSP-FTRSAQSNLDCATARRPLESDQGDPFTLFNVFNAWVQVKSERSGNSRKWCRR 671

  Fly   754 NFIQYRSMKRARDVREQLVGLMQ 776
            ..::...:....::|.|...|::
Mouse   672 RGVEEHRLYEMANLRRQFKELLE 694

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
l(2)37CbNP_609946.1 PTZ00121 <6..267 CDD:173412 39/210 (19%)
HrpA 251..>868 CDD:441249 204/543 (38%)
Dhx34NP_082159.3 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..27 7/19 (37%)
HrpA 162..>628 CDD:441249 189/476 (40%)
DEAH box 281..284 2/2 (100%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 726..764
OB_NTP_bind 800..911 CDD:400182
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1091..1114
Blue background indicates that the domain is not in the aligned region.

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