DRSC/TRiP Functional Genomics Resources

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Protein Alignment l(2)37Cb and Dhx16

DIOPT Version :9

Sequence 1:NP_609946.1 Gene:l(2)37Cb / 35192 FlyBaseID:FBgn0086444 Length:894 Species:Drosophila melanogaster
Sequence 2:XP_006524936.1 Gene:Dhx16 / 69192 MGIID:1916442 Length:1049 Species:Mus musculus


Alignment Length:906 Identity:597/906 - (65%)
Similarity:740/906 - (81%) Gaps:25/906 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 SGKNRKRTASSSSSGEEPDSEEE------SRLKDLQERDEFASRLKKRDDDRTRNVVDSTGGRRA 60
            ||| ||...|.|.:.|:|.||:|      .||:||:|||.||.|:::||.||||||::.: .::|
Mouse   145 SGK-RKAGGSKSPTEEKPASEDEWERTERERLQDLEERDAFAERVRQRDKDRTRNVLERS-DKKA 207

  Fly    61 IEEATKRLKLEHEDRDKIVPHLRLQSRRQYLEKRKDDKVAELEADILDDEYLFDESVLTKREKEE 125
            .|||.||||:..|||..:||.||.:|||:||.||:.:|:.:|||::.|:|.||.:..|::.|:.|
Mouse   208 YEEAQKRLKMAEEDRKAMVPELRKKSRREYLAKREREKLEDLEAELADEEVLFGDVELSRHERRE 272

  Fly   126 REYKKQLLNIAKEHEKARELERIQ---RYNMPQDLKKGERSEYVEVDEFEK-QPNSEQKKWEAEQ 186
            .:||:::.::|:|:..|.|.|:::   ||:||:: .:|:.:..|::.|.|. .|..||::||..|
Mouse   273 LKYKRRVRDLAREYRAAGEQEKLEATNRYHMPKE-TRGQPARTVDIVEEESGAPGEEQRRWEEAQ 336

  Fly   187 LASARFHFGAKDAKAEE-EYELLL--DDQIDFIQALTLDGSREKSSSRQPELTEKERKRLTLDET 248
            |.:|...|||:||.|:| :|:|:|  |:.|:|::|..|.|..|.|.   |.|:.:.:::.::...
Mouse   337 LGAASLKFGARDAAAQEAKYQLVLEEDETIEFVRAAQLQGDEEPSG---PPLSAQAQQKESIQAV 398

  Fly   249 RRSLPVYPFKEDLIAAVKEHQVLIIEGETGSGKTTQVPQYLVEAGFTKDKKMIGCTQPRRVAAMS 313
            ||||||:||:|:|:||:..|||||||||||||||||:||||.|.|:||....|.|||||||||||
Mouse   399 RRSLPVFPFREELLAAIANHQVLIIEGETGSGKTTQIPQYLFEEGYTKKGMKIACTQPRRVAAMS 463

  Fly   314 VAARVAEEMGVKLGNEVGYSIRFEDCTSDRTILKYMTDGTLHREFLSEPDLASYSVMIIDEAHER 378
            ||||||.|||||||||||||||||||||:||:|:|||||.|.||||||||||||||:::||||||
Mouse   464 VAARVAREMGVKLGNEVGYSIRFEDCTSERTVLRYMTDGMLLREFLSEPDLASYSVVMVDEAHER 528

  Fly   379 TLHTDILFGLVKDIARFRPELKLLISSATLDAEKFSAFFDDAPIFRIPGRRYPVDIFYTKAPEAD 443
            ||||||||||:||:||||||||:|::|||||..:|||||||||:|||||||:|||||||||||||
Mouse   529 TLHTDILFGLIKDVARFRPELKVLVASATLDTARFSAFFDDAPVFRIPGRRFPVDIFYTKAPEAD 593

  Fly   444 YIDACCVSVLQIHATQPLGDILVFLTGQ-----DEIETCQEVLHDRVKRLGSKIRELIVIPVYAN 503
            |::||.|||||||.|||.||||||||||     :|||...|:|.||.:|||||||||:|:|:|||
Mouse   594 YLEACVVSVLQIHVTQPPGDILVFLTGQVSAVVEEIEAACEMLQDRCRRLGSKIRELLVLPIYAN 658

  Fly   504 LPSDMQAKIFEPTPPNARKVILATNIAETSLTIDNIIYVIDPGFAKQNNFNSRTGMESLMVVPIS 568
            |||||||:||:||||.||||::|||||||||||:.||||:||||.||.::|.|||||||.|.|.|
Mouse   659 LPSDMQARIFQPTPPGARKVVVATNIAETSLTIEGIIYVLDPGFCKQKSYNPRTGMESLTVTPCS 723

  Fly   569 KASANQRAGRAGRTAPGKCFRLYTAWAYKHELEDNTVPEIQRINLGNAVLMLKALGINDLIHFDF 633
            |||||||||||||.|.||||||||||||:||||:.|||||||.:|||.||:||:|||:||:||||
Mouse   724 KASANQRAGRAGRVAAGKCFRLYTAWAYQHELEETTVPEIQRTSLGNVVLLLKSLGIHDLMHFDF 788

  Fly   634 LDPPPHETLVLALEQLYALGALNHHGELTKLGRRMAEFPVDPMMGKMLLASEKYKCSEEMVTIAA 698
            |||||:|||:||||||||||||||.||||..||:|||.|||||:.||:||||||.||||::|:||
Mouse   789 LDPPPYETLLLALEQLYALGALNHLGELTTSGRKMAELPVDPMLSKMILASEKYSCSEEILTVAA 853

  Fly   699 MLSVNSAIFYRPKDKIIHADTARKNFNHMHGDHLSLLQVYNQWAETDYSTQWCYENFIQYRSMKR 763
            |||||::||||||||::|||.||.||....||||.||.||.||||:.||:|||||||:|:|||:|
Mouse   854 MLSVNNSIFYRPKDKVVHADNARVNFFLPGGDHLVLLNVYTQWAESGYSSQWCYENFVQFRSMRR 918

  Fly   764 ARDVREQLVGLMQRVEIDMVSCLPETVNVRKAATAGYFYHVARLSKGGHYKTIKHNQTVMIHPNS 828
            ||||||||.||::|||:.:.||..:.|.||||.|:|||||.|||::.| |:|:|..|||.|||||
Mouse   919 ARDVREQLEGLLERVEVGLTSCQGDYVRVRKAITSGYFYHTARLTRSG-YRTVKQQQTVFIHPNS 982

  Fly   829 SLFEELPRWVLYHELVFTSKEYMRQVIEIESKWLLEVAPHYYKAKELEDSTNKKMPKVAGR 889
            ||||:.|||:||||||.|:||:||||:||||.|||||||||||||||||...|||||..|:
Mouse   983 SLFEQQPRWLLYHELVLTTKEFMRQVLEIESSWLLEVAPHYYKAKELEDPHAKKMPKKVGK 1043

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
l(2)37CbNP_609946.1 HrpA 222..867 CDD:224557 478/649 (74%)
DEXDc 269..408 CDD:238005 115/138 (83%)
HELICc 491..581 CDD:197757 70/89 (79%)
HA2 651..735 CDD:214852 60/83 (72%)
OB_NTP_bind 770..869 CDD:285018 66/98 (67%)
Dhx16XP_006524936.1 PTZ00121 <147..>410 CDD:173412 112/268 (42%)
HrpA 377..1036 CDD:224557 489/662 (74%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167843036
Domainoid 1 1.000 200 1.000 Domainoid score I3045
eggNOG 1 0.900 - - E1_COG1643
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H2658
Inparanoid 1 1.050 1194 1.000 Inparanoid score I190
Isobase 1 0.950 - 0 Normalized mean entropy S654
OMA 1 1.010 - - QHG53574
OrthoDB 1 1.010 - - D113216at33208
OrthoFinder 1 1.000 - - FOG0000059
OrthoInspector 1 1.000 - - oto93751
orthoMCL 1 0.900 - - OOG6_100085
Panther 1 1.100 - - LDO PTHR18934
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R178
SonicParanoid 1 1.000 - - X141
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1716.750

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