DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment l(2)37Cb and Dhx38

DIOPT Version :9

Sequence 1:NP_609946.1 Gene:l(2)37Cb / 35192 FlyBaseID:FBgn0086444 Length:894 Species:Drosophila melanogaster
Sequence 2:NP_848467.1 Gene:Dhx38 / 64340 MGIID:1927617 Length:1228 Species:Mus musculus


Alignment Length:918 Identity:385/918 - (41%)
Similarity:559/918 - (60%) Gaps:67/918 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 SSSSGEEPDSEEESRLKDLQERDEFASRLKKRDDDRTRNVVDSTGGRRAIEEATKRLKLEHEDRD 76
            |...|...|.||.......:||.::..  .:|..||...::|     ...:|....|....||  
Mouse   292 SRGRGRREDGEEGIAFDTEEERQQWED--DQRQADRDWYMMD-----EGYDEFHNPLAYSSED-- 347

  Fly    77 KIVPHLRLQSRRQYLEKRKDDKVAELEADILDDEYLFDES-VLTK----REKEEREYKKQLLNIA 136
                  .::.|.|:|.|:|..:::.....|.:|...::.: :||.    |.:.:.::::.  |.|
Mouse   348 ------YVRRREQHLHKQKQKRISAQRRQINEDNERWETNRMLTSGVVHRLEVDEDFEED--NAA 404

  Fly   137 KEHEKAREL------ERIQRYNMPQ----------DL----KKGERSEYVEVDEFEKQPNSEQKK 181
            |.|.....|      .||.....|:          ||    :||.::.....::.|:: .::.|.
Mouse   405 KVHLMVHNLVPPFLDGRIVFTKQPEPVIPVKDATSDLAIIARKGSQTVRKHREQKERR-KAQHKH 468

  Fly   182 WEAEQLASARFH--FGAKDAKAEEEYELLLDD-QIDF-IQALTLDGSREKSSSRQPELTEKERKR 242
            ||   ||..:..  .|.|  |.||..:.:.:| ::|: .:....|..:|||     |.:.:..|:
Mouse   469 WE---LAGTKLGDIMGVK--KEEEPDKAMTEDGKVDYRTEQKFADHMKEKS-----EASSEFAKK 523

  Fly   243 LTLDETRRSLPVYPFKEDLIAAVKEHQVLIIEGETGSGKTTQVPQYLVEAGFTKDKKMIGCTQPR 307
            .::.|.|:.||::..:::|:..::::.::|:.||||||||||:.|||.|.|:| |..||||||||
Mouse   524 KSILEQRQYLPIFAVQQELLTIIRDNSIVIVVGETGSGKTTQLTQYLHEDGYT-DYGMIGCTQPR 587

  Fly   308 RVAAMSVAARVAEEMGVKLGNEVGYSIRFEDCTSDRTILKYMTDGTLHREFLSEPDLASYSVMII 372
            ||||||||.||:||||..||.||||:||||||||:.|::||||||.|.||.|.|.||..||.:|:
Mouse   588 RVAAMSVAKRVSEEMGGNLGEEVGYAIRFEDCTSENTLIKYMTDGILLRESLREADLDHYSAVIM 652

  Fly   373 DEAHERTLHTDILFGLVKDIARFRPELKLLISSATLDAEKFSAFFDDAPIFRIPGRRYPVDIFYT 437
            ||||||:|:||:||||::::...|.:|||:::|||:|||||:|||.:.|||.||||.:||||.::
Mouse   653 DEAHERSLNTDVLFGLLREVVARRSDLKLIVTSATMDAEKFAAFFGNVPIFHIPGRTFPVDILFS 717

  Fly   438 KAPEADYIDACCVSVLQIHATQPLGDILVFLTGQDEIETCQEVLHDRVKRLGSKIRELIVIPVYA 502
            |.|:.||::|.....||:|.:...||||:|:.||::||...:.:.:.::.| .....|.|:|:|:
Mouse   718 KTPQEDYVEAAVKQSLQVHLSGAPGDILIFMPGQEDIEVTSDQIVEHLEEL-ENAPALAVLPIYS 781

  Fly   503 NLPSDMQAKIFEPTPPNARKVILATNIAETSLTIDNIIYVIDPGFAKQNNFNSRTGMESLMVVPI 567
            .||||:|||||:..|...||.|:||||||||||:|.|::|||.|:.|...||.|.||::|.:.||
Mouse   782 QLPSDLQAKIFQKAPDGVRKCIVATNIAETSLTVDGIMFVIDSGYCKLKVFNPRIGMDALQIYPI 846

  Fly   568 SKASANQRAGRAGRTAPGKCFRLYTAWAYKHELEDNTVPEIQRINLGNAVLMLKALGINDLIHFD 632
            |:|:||||:||||||.||:||||||..|||:||...|||||||.||.|.||:||:||:.||:.|.
Mouse   847 SQANANQRSGRAGRTGPGQCFRLYTQSAYKNELLTTTVPEIQRTNLANVVLLLKSLGVQDLLQFH 911

  Fly   633 FLDPPPHETLVLALEQLYALGALNHHGELTKLGRRMAEFPVDPMMGKMLLASEKYKCSEEMVTIA 697
            |:||||.:.::.::.||:.||||::.|.||..||.|.|||:||.:.|||:.|....||.|::.|.
Mouse   912 FMDPPPEDNMLNSMYQLWILGALDNTGGLTSTGRLMVEFPLDPALSKMLIVSCDMGCSSEILLIV 976

  Fly   698 AMLSVNSAIFYRPKDKIIHADTARKNFNHMHGDHLSLLQVYNQWAETDYSTQWCYENFIQYRSMK 762
            :|||| .|||||||.:...:|..|:.|.....|||:.|.||.||...:|||.||.::||..::|:
Mouse   977 SMLSV-PAIFYRPKGREEESDQIREKFAVPESDHLTYLNVYLQWKNNNYSTIWCNDHFIHAKAMR 1040

  Fly   763 RARDVREQLVGLMQRVEIDMVSCLPETVNVRKAATAGYFYHVARLSKGGHYKTIKHNQTVMIHPN 827
            :.|:||.||..:|.:..:.:.||..:...|||...|.||:..|:|...|.|..|:......:||.
Mouse  1041 KVREVRAQLKDIMVQQRMSLASCGTDWDIVRKCICAAYFHQAAKLKGIGEYVNIRTGMPCHLHPT 1105

  Fly   828 SSLF--EELPRWVLYHELVFTSKEYMRQVIEIESKWLLEVAPHYYKAKELEDS--TNKKMPKVAG 888
            ||||  ...|.:::|||||.|:||||:.|..::.:||.|:.|.:|..|:...|  .|::..|...
Mouse  1106 SSLFGMGYTPDYIVYHELVMTTKEYMQCVTAVDGEWLAELGPMFYSVKQAGKSRQENRRRAKEEA 1170

  Fly   889 RA---EMA 893
            .|   |||
Mouse  1171 SAMEEEMA 1178

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
l(2)37CbNP_609946.1 HrpA 222..867 CDD:224557 325/646 (50%)
DEXDc 269..408 CDD:238005 90/138 (65%)
HELICc 491..581 CDD:197757 51/89 (57%)
HA2 651..735 CDD:214852 40/83 (48%)
OB_NTP_bind 770..869 CDD:285018 38/100 (38%)
Dhx38NP_848467.1 DEXDc 527..714 CDD:214692 113/187 (60%)
DEXDc 552..688 CDD:238005 90/136 (66%)
HELICc 759..862 CDD:197757 54/103 (52%)
HA2 931..1013 CDD:214852 40/82 (49%)
OB_NTP_bind <1064..1147 CDD:285018 32/82 (39%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1643
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D113216at33208
OrthoFinder 1 1.000 - - FOG0000059
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100085
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X141
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
65.720

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