DRSC/TRiP Functional Genomics Resources

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Protein Alignment l(2)37Cb and dhx29

DIOPT Version :9

Sequence 1:NP_609946.1 Gene:l(2)37Cb / 35192 FlyBaseID:FBgn0086444 Length:894 Species:Drosophila melanogaster
Sequence 2:XP_697933.6 Gene:dhx29 / 553505 ZFINID:ZDB-GENE-130530-606 Length:1377 Species:Danio rerio


Alignment Length:1203 Identity:298/1203 - (24%)
Similarity:499/1203 - (41%) Gaps:357/1203 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 KNRKRTASSSSSGEEPDSEEESRLKDLQERD-----EFASRLKKRDDDRTRNVVDSTGGRRAIEE 63
            ::||:   ..:..:||..||:.:.|...:.|     |:..|..::.:|::.:           ||
Zfish   188 EDRKQ---QGNKNQEPKEEEKPKAKTPVKDDGGSMKEWILRYAQQSEDQSSD-----------EE 238

  Fly    64 ATKRLKLEHEDRDKIVPHLR--LQSRRQY-------LEKRKDDK-----------VAELEADILD 108
            ..:.:....|..:|..|:.|  |.:.:.|       ..|.|.||           |.:.|...|:
Zfish   239 QKEDIVHNPELDEKFDPNDRYLLLTAQLYDAKEMTTTSKAKKDKMGQRAAQDRIRVIQQEMKTLE 303

  Fly   109 DEYLFDESVLTK-REKEEREYK-----KQLLNI--------------AKEHEKARELERIQRYNM 153
            ...:|:.::..| ..|||::..     |:.||.              |...:|.:|.:.|:.::.
Zfish   304 SHPVFNTAIKVKDTPKEEKKAAVVTDGKEELNFNLFEQAEAAPAEKNAVAEKKKKEPKDIRNFDY 368

  Fly   154 PQDLKKGERSEYVEVDEFEKQ-PNSEQKKWEAEQLASARF------------------------- 192
            ......|:..:...:|...|. |.|....:  .::|:.|:                         
Zfish   369 TSRSWTGKSPKQFLIDWCRKNLPKSPPPSF--NKVAAGRYWKCKVRIQRPTDVLEVCPTILTEDG 431

  Fly   193 ----HFGA----------------------------KDAKAEEEYELLL-----DDQIDFIQALT 220
                |.||                            :|.:.:||.:.||     .||  ||..|.
Zfish   432 MQAQHLGATLALYNLVKGQSVHQLLPPTYRDVWLEWRDGEQKEEEQTLLAINKPRDQ--FISRLL 494

  Fly   221 LDGSREKSSSRQPE-------------------------------------LTEKERKRL----- 243
            ....:::|...|||                                     :.|:..:||     
Zfish   495 TRLKQQQSLQSQPEPQKLLQDAEPEDSWENLDTQEEQEPQCGAASGGPAGLVVEEASRRLLLKLQ 559

  Fly   244 -------TLDETRRSLPVYPFKEDLIAAVKEHQVLIIEGETGSGKTTQVPQYLVE----AGFTKD 297
                   .||| |:.|||:..:|.::.|::.|:||:|.|||||||:||:||:::|    ||.|..
Zfish   560 ASPLARRLLDE-RKQLPVFQHREQVLEALRHHRVLVIAGETGSGKSTQIPQFILEELLAAGDTAQ 623

  Fly   298 KKMIGCTQPRRVAAMSVAARVAEEMGVKLG----NEV-GYSIRFEDCTSDRTILKYMTDGTLHRE 357
            ...:..|||||::|||:|.||::|:|.:.|    |.: ||.||.|:.:|:.|.|.|.|.|.|.|:
Zfish   624 PCSVVVTQPRRISAMSLACRVSQELGSEDGPGSMNSLCGYQIRMENRSSEATRLLYCTTGVLLRK 688

  Fly   358 FLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIARFRPELKLLISSATLDAEKFSAFFDDAPI 422
            ...:..|.|.:.:|:||.|||::.:|.|..::|::...|.:|:|::.|||:|.:||:.:|:..|:
Zfish   689 LQQDRHLNSLTHIIVDEVHERSVQSDFLLTILKEVVHKRADLRLILMSATVDCQKFANYFNRCPV 753

  Fly   423 FRIPGRRYPVDIFYTK------------------------------------------------- 438
            ..||||.:||::|:.:                                                 
Zfish   754 VSIPGRTFPVEVFHLEDIVEETGYVLEQDSEYSQKFVEEEEEVNIGITQKGGKTVQHQELIVRDS 818

  Fly   439 ------APEADYIDACCVSVLQIHATQPL----------------------GDILVFLTGQDEIE 475
                  .||.|:..:....:||......:                      |.:||||.|...|:
Zfish   819 ASGWDLGPELDHFSSRTRHILQYMNPNKINMDLILDLLAYLDKSPQFNAVDGAVLVFLPGLAHIQ 883

  Fly   476 TCQEVLHDRV---KRLGSKIRELIVIPVYANLPSDMQAKIFEPTPPNARKVILATNIAETSLTID 537
            .    |||.:   ||..||.|..:| .::::|.|..|:..|...|...||::|:||||||.:||.
Zfish   884 Q----LHDLLSTDKRFSSKDRYKLV-ALHSSLSSQDQSSAFTVPPAGVRKIVLSTNIAETGVTIP 943

  Fly   538 NIIYVIDPGFAKQNNFNSRTGMESLMVVPISKASANQRAGRAGRTAPGKCFRLYTAWAYKHELED 602
            ::::|||.|..|:|.::..:.|.||:.:.:|||||.||.|||||...|.|||||..:.::..: |
Zfish   944 DVVFVIDTGRTKENRYHESSQMSSLVEMFVSKASALQRQGRAGRVREGFCFRLYPKFRFESFI-D 1007

  Fly   603 NTVPEIQRINLGNAVL--MLKALGINDLIHFDF----LDPPPHETLVLALEQLYALGALNHHGE- 660
            .::|||.|:.|....|  |....|..:    ||    ||.|..:.:..|:..|..:||...... 
Zfish  1008 YSIPEILRVPLEELCLHIMKCEYGSPE----DFLSRSLDAPQQQAVCNAVSLLRRIGACQQDTHT 1068

  Fly   661 LTKLGRRMAEFPVDPMMGKMLLASEKYKCSEEMVTIAAMLSVNSAIFYRPKDKIIHADTARKNFN 725
            ||.||..:|..||:..:||||:....:.|.|.:.||||.:|..|. |..|..:...|:.|:....
Zfish  1069 LTPLGHHLAALPVNVKIGKMLIFGAIFGCLEPIATIAAAMSEKSP-FATPMSRKEEANLAKSALA 1132

  Fly   726 HMHGDHLSLLQVYNQW---------AETDYSTQWCYENFIQYRSMKRARDVREQLVGLMQRVEI- 780
            ..:.||:::.:.|..|         ||.:|    |..:|:...::....:|:::|:.::::... 
Zfish  1133 VANSDHMTIYKAYLGWRSSRTEGTRAEMNY----CRRHFLNRTALITIEEVKQELMRMVEQAGFV 1193

  Fly   781 -----------------DMVSCLPETVNVRKAA-TAGYFYHVARL----SKGGHYKTIKHNQTVM 823
                             ..:|...:.|.|.||. |||.:.:|.|:    |.....:.:...:|..
Zfish  1194 SSKLGRTPRPRPSTETKAPLSISTQDVCVVKATLTAGLYDNVGRILYSPSLDVQERVVCVVETAQ 1258

  Fly   824 ----IHPNS-SLFEELPRWVLYHELVFTSKEYMRQV--------------IEIESK--------W 861
                :||:| :.|.:...|:|:.|.|..||.:::..              |:::.:        |
Zfish  1259 GKAHVHPSSVNRFLQTHGWMLFQEKVKYSKVFLKDTTLISPLSMLLFGGDIDVQHRERLISLDGW 1323

  Fly   862 LLEVAP-----HYYKAKELEDS------TNKKM 883
            :...||     .:...::|.||      .|.||
Zfish  1324 ICFQAPVRIGVIFKHLRKLIDSLLERKLANPKM 1356

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
l(2)37CbNP_609946.1 HrpA 222..867 CDD:224557 232/848 (27%)
DEXDc 269..408 CDD:238005 62/147 (42%)
HELICc 491..581 CDD:197757 38/89 (43%)
HA2 651..735 CDD:214852 27/84 (32%)
OB_NTP_bind 770..869 CDD:285018 27/153 (18%)
dhx29XP_697933.6 DEXDc 568..766 CDD:214692 84/198 (42%)
DEXDc 591..738 CDD:238005 61/146 (42%)
HELICc 841..996 CDD:238034 56/159 (35%)
HA2 1065..1140 CDD:214852 25/75 (33%)
OB_NTP_bind 1181..1309 CDD:285018 23/127 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1643
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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