DRSC/TRiP Functional Genomics Resources

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Protein Alignment l(2)37Cb and dhx33

DIOPT Version :9

Sequence 1:NP_609946.1 Gene:l(2)37Cb / 35192 FlyBaseID:FBgn0086444 Length:894 Species:Drosophila melanogaster
Sequence 2:XP_002932324.1 Gene:dhx33 / 447985 XenbaseID:XB-GENE-949473 Length:678 Species:Xenopus tropicalis


Alignment Length:642 Identity:285/642 - (44%)
Similarity:413/642 - (64%) Gaps:12/642 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly   241 KRLTLDETRRSLPVYPFKEDLIAAVKEHQVLIIEGETGSGKTTQVPQYLVEAGFTKDKKMIGCTQ 305
            |::|::|.|||||:|..:..:||.:::...::|.||||||||||:||||.||...: :.:|..||
 Frog    34 KKMTVEEQRRSLPIYLARSQIIAQLRKLDSVVIIGETGSGKTTQIPQYLYEASIGR-QSIIAVTQ 97

  Fly   306 PRRVAAMSVAARVAEEMGVKLGNEVGYSIRFEDCTSDRTILKYMTDGTLHREFLSEPDLASYSVM 370
            ||||||:|:|.||:||...:|...|||::||||.||:.|.:|::|||.|.||.:.:|.|..|||:
 Frog    98 PRRVAAISLATRVSEERRTELSKLVGYTVRFEDVTSEETKIKFLTDGMLLREAIGDPLLRKYSVV 162

  Fly   371 IIDEAHERTLHTDILFGLVKDIARFRPE-----LKLLISSATLDAEKFSAFFDDAPIFRIPGRRY 430
            |:|||||||:|||:|||:||...:.|.|     ||::|.|||:|.:.||.:|:.||:..:.||::
 Frog   163 ILDEAHERTIHTDVLFGVVKSAQKKRKEQEKQPLKIIIMSATMDVDLFSEYFNGAPVLYLEGRQH 227

  Fly   431 PVDIFYTKAPEADYIDACCVSVLQIHATQPLG-DILVFLTGQDEIETCQEVLHDRVKRLGSKIRE 494
            |:.|||||..::||:.|..|:|.|:|...|.. |||||||||:|||...:...|..|.|.....:
 Frog   228 PIQIFYTKESQSDYLQAALVTVFQVHQEVPASHDILVFLTGQEEIEAMTKTCRDISKHLPDDCPK 292

  Fly   495 LIVIPVYANLPSDMQAKIFEPTPPNARKVILATNIAETSLTIDNIIYVIDPGFAKQNNFNSRTGM 559
            ::|:|:||:||...|.::|:..|...|||||:|||||||:||..|.||:|.|..|...:|..:|:
 Frog   293 MVVMPLYASLPHSQQLRVFQNAPKGQRKVILSTNIAETSITIPGIKYVVDTGMVKAKKYNPESGL 357

  Fly   560 ESLMVVPISKASANQRAGRAGRTAPGKCFRLYTAWAYKHELEDNTVPEIQRINLGNAVLMLKALG 624
            |.|.|..:|||.|.||.|||||...|.|:|||....:: :.|:.|||||||.||.:.:|.|..|.
 Frog   358 EVLAVQKVSKAQAWQRTGRAGREDSGICYRLYKEEEFE-KFEEMTVPEIQRCNLASVMLQLLVLR 421

  Fly   625 INDLIHFDFLDPPPHETLVLALEQLYALGALNHHGE---LTKLGRRMAEFPVDPMMGKMLLASEK 686
            :.::..|||:..|..:::..|::||:.|||:...|:   ||.||::||.||::|...|.:|.|.|
 Frog   422 VPNVHTFDFMSKPSPDSIQAAIDQLHLLGAVERKGDQIVLTPLGKKMAAFPLEPKFSKTILLSPK 486

  Fly   687 YKCSEEMVTIAAMLSVNSAIFYRPKDKIIHADTARKNFNHMHGDHLSLLQVYNQWAETDYSTQWC 751
            :.|:||::||.::|||:| :.:.|..|......|||.|....|||::||.:|..:.....:..||
 Frog   487 FHCTEEILTIVSLLSVDS-VLHNPASKRDEVQAARKKFISSEGDHITLLNIYRAFKNLGKNKDWC 550

  Fly   752 YENFIQYRSMKRARDVREQLVGLMQRVEIDMVSCLPETVNVRKAATAGYFYHVARLSKGGHYKTI 816
            .||||..|:|....:||.||..:..::.:.|.|...:|.|:|:....|.|.|.|.|...|.|.|:
 Frog   551 RENFINGRNMTMVLEVRSQLRDICIKLSMPMESSRTDTRNIRQCLAHGLFMHAAELQPDGTYTTV 615

  Fly   817 KHNQTVMIHPNSSLFEELPRWVLYHELVFTSKEYMRQVIEIESKWLLEVAPHYYKAK 873
            ..:|.:.|||:|.||...|..|:|:||:.|||.|||.:..:::.||.|.||.|::.|
 Frog   616 DTHQPIAIHPSSILFHCKPACVVYNELLHTSKCYMRDLCVVDADWLFEAAPDYFRRK 672

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
l(2)37CbNP_609946.1 HrpA 222..867 CDD:224557 281/634 (44%)
DEXDc 269..408 CDD:238005 78/143 (55%)
HELICc 491..581 CDD:197757 43/89 (48%)
HA2 651..735 CDD:214852 35/86 (41%)
OB_NTP_bind 770..869 CDD:285018 38/98 (39%)
dhx33XP_002932324.1 HrpA 38..667 CDD:224557 280/631 (44%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53574
OrthoDB 1 1.010 - - D354219at2759
OrthoFinder 1 1.000 - - FOG0000059
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.930

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