DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment l(2)37Cb and zcchc17

DIOPT Version :9

Sequence 1:	NP_609946.1	Gene:	l(2)37Cb / 35192	FlyBaseID:	FBgn0086444	Length:	894	Species:	Drosophila melanogaster
Sequence 2:	NP_956838.2	Gene:	zcchc17 / 393516	ZFINID:	ZDB-GENE-040325-2	Length:	235	Species:	Danio rerio

Alignment Length:	154	Identity:	31/154 - (20%)
Similarity:	58/154 - (37%)	Gaps:	27/154 - (17%)

- Green bases have known domain annotations that are detailed below.

  Fly    28 KDLQERDEFASRLKKRDDDRTRNVVDSTGGRRAIEEATKRLKLEHEDRDKIVPHLRLQSRRQYLE 92
            :||...:..|    ::|:.|.|...|.:|.|..:|........:...|.............||..
Zfish    99 RDLDPNNVIA----EQDERRRRQFRDHSGQRITLEAVLNTTCKKCGCRGHFAKDCFSSPGLQYSL 159

  Fly    93 KRKDDKVAELEADILDDEYLFDESVLTKREKEEREYKKQLLNIAKEHEKARELERIQRYNMPQDL 157
            ..::::...|...|...|        .::.|:|::.||:     |:.:|.|:.|.....:..:|.
Zfish   160 LPEEEEEEPLSTQITQSE--------PQKRKKEKKAKKE-----KKKKKERKRENSSSDSSNEDA 211

  Fly   158 KKGERSEYVEVDEFEKQPNSEQKK 181
            |:.:.|          ..:||:||
Zfish   212 KRPKHS----------HTHSEKKK 225

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID
l(2)37Cb	NP_609946.1	HrpA	222..867	CDD:224557
		DEXDc	269..408	CDD:238005
		HELICc	491..581	CDD:197757
		HA2	651..735	CDD:214852
		OB_NTP_bind	770..869	CDD:285018
zcchc17	NP_956838.2	S1_pNO40	16..89	CDD:240191
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG1643
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	1	0.900