DRSC/TRiP Functional Genomics Resources

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Protein Alignment l(2)37Cb and l(1)G0007

DIOPT Version :9

Sequence 1:NP_609946.1 Gene:l(2)37Cb / 35192 FlyBaseID:FBgn0086444 Length:894 Species:Drosophila melanogaster
Sequence 2:NP_572947.1 Gene:l(1)G0007 / 32373 FlyBaseID:FBgn0026713 Length:1222 Species:Drosophila melanogaster


Alignment Length:1041 Identity:388/1041 - (37%)
Similarity:567/1041 - (54%) Gaps:170/1041 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 KNRKRTASSSSSGE------------------EPDSEEESRLKDLQERDEFAS--RLKKRDDDRT 48
            ::|||...||::.|                  :.|.:.:.|....:|||...|  |.:.||.||.
  Fly   141 RDRKRGPVSSTAAEGRDRDRDWDRDRRRDRDRDRDRDRDRRQHRERERDRHRSWDRDRGRDRDRD 205

  Fly    49 RNVVD--------------STGG--RRAIEEATKRLKLEHEDRDKIVPHLRLQ-----------S 86
            |::.:              |:||  ..:.::..........|.|...|.....           |
  Fly   206 RSMSERSVHTPREPGTPGGSSGGISNSSWDDEDGEFGQRKSDWDMPTPRRHGNKSGDWSVRSGGS 270

  Fly    87 RRQYLEKRKDDKVAELEADILDD-----------EYLFDESVLTKREKEEREYKKQLLNIAKEHE 140
            ||.:  .|:||.|....|...:.           .:..|...|...|:|:|...::..||.:.::
  Fly   271 RRNH--GRQDDTVRPTPAHRYNQWAHGRKRSGATPWGEDPESLDLWEEEQRRLDREWYNIDEGYD 333

  Fly   141 KARELERIQRYNMPQDLKKGERSEYVE------VDEFEKQPNSEQKKWEAEQ--------LASAR 191
                 :....:..|......:|.|.:|      :...::|.|.:.:.||..:        |.|..
  Fly   334 -----DENNPFGGPNSEYFRKREEQLEQKRTKRISAQQRQNNRDNELWERNRMLTSGVVTLISVN 393

  Fly   192 FHFGAKDAKAEEEYELL--------LDDQIDF----------------IQALTLDGS-------- 224
            ..|   |.:|.|...||        ||.:|.|                :..|...||        
  Fly   394 DDF---DEEALERVHLLVHHIIPPFLDGRIVFTKQPEPVVPVKDPTSDMALLARKGSALVRNYRE 455

  Fly   225 ---REKSSSRQPELT-----------------------EKER----------------------- 240
               |.|:..:..||:                       ||::                       
  Fly   456 QKERRKAQKKHWELSGTKLGNIMGVQRPQDEDDMRFDKEKDKADYRKDQKFADHMRDQDTGGKSD 520

  Fly   241 --KRLTLDETRRSLPVYPFKEDLIAAVKEHQVLIIEGETGSGKTTQVPQYLVEAGFTKDKKMIGC 303
              ::.|:.|.||.|||:..:::|:..::|:.|:||.||||||||||:.|||.|.|::| :.||||
  Fly   521 FSRKKTISEQRRFLPVFASRQELLNVIRENSVIIIVGETGSGKTTQLTQYLHEDGYSK-RGMIGC 584

  Fly   304 TQPRRVAAMSVAARVAEEMGVKLGNEVGYSIRFEDCTSDRTILKYMTDGTLHREFLSEPDLASYS 368
            ||||||||||||.||::||..:||.:|||:||||||||:||::||||||.|.||.|.:|:|.|||
  Fly   585 TQPRRVAAMSVAKRVSDEMDTQLGEDVGYAIRFEDCTSERTVIKYMTDGILLRESLRDPELDSYS 649

  Fly   369 VMIIDEAHERTLHTDILFGLVKDIARFRPELKLLISSATLDAEKFSAFFDDAPIFRIPGRRYPVD 433
            .:|:||||||:|.||:||||:::|...|.:|||:::|||:|:.||:.||.:.|.|.||||.:|||
  Fly   650 AIIMDEAHERSLSTDVLFGLLREIVARRHDLKLIVTSATMDSSKFATFFGNVPTFTIPGRTFPVD 714

  Fly   434 IFYTKAPEADYIDACCVSVLQIHATQPLGDILVFLTGQDEIETCQEVLHDRVKRLGSKIRELIVI 498
            :.::|....||:::.....||:|.|...||:|:|:.||::||...|||.:|:..: .....|.::
  Fly   715 VMFSKNTCEDYVESAVKQALQVHLTPNEGDMLIFMPGQEDIEVTCEVLEERLAEI-DNAPALSIL 778

  Fly   499 PVYANLPSDMQAKIFEPTPPNARKVILATNIAETSLTIDNIIYVIDPGFAKQNNFNSRTGMESLM 563
            |:|:.||||:|||||:.:....||.::||||||||||:|.||||||.|:.|...:|.|.||::|.
  Fly   779 PIYSQLPSDLQAKIFQKSSDGLRKCVVATNIAETSLTVDGIIYVIDSGYCKLKVYNPRIGMDALQ 843

  Fly   564 VVPISKASANQRAGRAGRTAPGKCFRLYTAWAYKHELEDNTVPEIQRINLGNAVLMLKALGINDL 628
            :.|||:|:||||:||||||.||:.:||||...||.||...|||||||.||.|.||:||:||:.||
  Fly   844 IYPISQANANQRSGRAGRTGPGQAYRLYTQRQYKDELLALTVPEIQRTNLANTVLLLKSLGVVDL 908

  Fly   629 IHFDFLDPPPHETLVLALEQLYALGALNHHGELTKLGRRMAEFPVDPMMGKMLLASEKYKCSEEM 693
            :.|.|:||||.:.::.:|.||:.||||:|.|.||.|||:|||||:||...:||:.:.:..||.|:
  Fly   909 LQFHFMDPPPQDNILNSLYQLWILGALDHTGALTTLGRQMAEFPLDPPQCQMLIVACRMGCSAEV 973

  Fly   694 VTIAAMLSVNSAIFYRPKDKIIHADTARKNFNHMHGDHLSLLQVYNQWAETDYSTQWCYENFIQY 758
            :.|.:||||.| ||||||.:...||..|:.|.....|||:.|.||.||.:.:||:.||.|:||..
  Fly   974 LIIVSMLSVPS-IFYRPKGREDEADGVREKFQRPESDHLTYLNVYQQWRQNNYSSTWCNEHFIHI 1037

  Fly   759 RSMKRARDVREQLVGLMQRVEIDMVSCLPETVNVRKAATAGYFYHVARLSKGGHYKTIKHNQTVM 823
            ::|::.|:||:||..:|.:..:.::||..:...|||...:.|||..|||...|.|..::......
  Fly  1038 KAMRKVREVRQQLKDIMTQQNLSVISCGIDWDIVRKCICSAYFYQAARLKGIGEYVNLRTGMPCH 1102

  Fly   824 IHPNSSLF--EELPRWVLYHELVFTSKEYMRQVIEIESKWLLEVAPHYYKAKELEDSTNKKMPKV 886
            :||.|:|:  ...|.:|:||||:.|:||||:....::..||.|:.|.::..||...|..:|..:.
  Fly  1103 LHPTSALYGLGTTPDYVVYHELIMTAKEYMQCATAVDGYWLAELGPMFFSVKESGRSGREKKKQA 1167

  Fly   887 A 887
            |
  Fly  1168 A 1168

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
l(2)37CbNP_609946.1 HrpA 222..867 CDD:224557 322/705 (46%)
DEXDc 269..408 CDD:238005 90/138 (65%)
HELICc 491..581 CDD:197757 49/89 (55%)
HA2 651..735 CDD:214852 42/83 (51%)
OB_NTP_bind 770..869 CDD:285018 35/100 (35%)
l(1)G0007NP_572947.1 DEXDc 529..715 CDD:214692 112/186 (60%)
DEXDc 551..689 CDD:238005 90/138 (65%)
HELICc 722..870 CDD:238034 72/148 (49%)
HA2 932..1014 CDD:214852 42/82 (51%)
OB_NTP_bind 1048..1148 CDD:285018 34/99 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45468113
Domainoid 1 1.000 98 1.000 Domainoid score I366
eggNOG 1 0.900 - - E1_COG1643
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 234 1.000 Inparanoid score I130
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D113216at33208
OrthoFinder 1 1.000 - - FOG0000059
OrthoInspector 1 1.000 - - otm51353
orthoMCL 1 0.900 - - OOG6_100085
Panther 1 1.100 - - P PTHR18934
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X141
1110.800

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