DRSC/TRiP Functional Genomics Resources

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Protein Alignment l(2)37Cb and Dhx9

DIOPT Version :10

Sequence 1:NP_609946.1 Gene:l(2)37Cb / 35192 FlyBaseID:FBgn0086444 Length:894 Species:Drosophila melanogaster
Sequence 2:NP_001382485.1 Gene:Dhx9 / 304859 RGDID:1308548 Length:1392 Species:Rattus norvegicus


Alignment Length:921 Identity:246/921 - (26%)
Similarity:405/921 - (43%) Gaps:202/921 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 SGKNRKRTASSSSSGEE-PDSEEESRLKDL---QERDEFASRLKKRDDDRTRNVVDSTGGRRAIE 62
            :.:|.....|||..|.. |..:..:.|||.   :|..|..:.|:..:.|....:    .|...:|
  Rat   122 AAENNSGVESSSGYGSPGPTWDRGANLKDYYSRKEEQEVQATLESEEVDLNAGL----HGNWTLE 182

  Fly    63 EATKRLKLEHEDRDKI---------------------VPHLRLQSRRQYLEKRKDDKVAELEADI 106
            .|..||. ::..::||                     ..:::...||.:..:...:|....::..
  Rat   183 NAKARLN-QYFQKEKIQGEYKYTQVGPDHNRSFIAEMTIYIKQLGRRIFAREHGSNKKLAAQSCA 246

  Fly   107 LD-----------DEYLFDESVLTKREKEER----------EYKKQLLNIAKEHEKARELERIQ- 149
            |.           :.|    |.|||:::.||          :.:.||.|:.:|    .:||.:. 
  Rat   247 LSLVRQLYHLGVIEAY----SGLTKKKEGERVEPYKVFLSPDLELQLQNVVQE----LDLEIVPP 303

  Fly   150 --RYNMPQDLKKGERSEYVEVDEFEKQ----------PNSEQKKWEAEQ-----LASARFHFGAK 197
              ..:||..|..|:.:.:   :..::|          |.|....|.:..     ||.|.....:.
  Rat   304 PVDPSMPVILNIGKLAHF---EPSQRQNAVGVVPWSPPQSNWNPWTSSNIDEGPLAYASTEQISM 365

  Fly   198 DAKAEEEYELLLDDQIDFIQALTLDGSREKSSSRQPELTEKERKRLTLDETRRSLPVYPFKEDLI 262
            |.|.|..|::                  |:..:.|..|.|:|           .|||..|:.:::
  Rat   366 DLKNELAYQM------------------EQDHNLQSVLQERE-----------LLPVKKFEAEIL 401

  Fly   263 AAVKEHQVLIIEGETGSGKTTQVPQYLVEAGFTKDKKMIGC----TQPRRVAAMSVAARVAEEMG 323
            .|:.::.|:||.|.||.|||||||||::: .|.::.:...|    |||||::|::||.|||.|.|
  Rat   402 EAISQNSVVIIRGATGCGKTTQVPQYILD-DFIQNDRAAECNIVVTQPRRISAVAVAERVAYERG 465

  Fly   324 VKLGNEVGYSIRFED-CTSDRTILKYMTDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFG 387
            .:.|...|||:|||. .......:.:.|.|.|.|:.  |..:...|.:|:||.|||.::||.|..
  Rat   466 EEPGKSCGYSVRFESILPRPHASIMFCTVGVLLRKL--EAGIRGISHVIVDEIHERDINTDFLLV 528

  Fly   388 LVKDIARFRPELKLLISSATLDAEKFSAFFDDAPIFRIPGRRYPVDIFYTK---------APEAD 443
            :::|:....||:::::.|||:|...|..:|.:.||..:.||.:||..::.:         .|..|
  Rat   529 VLRDVVLAYPEVRIVLMSATIDTTMFCEYFFNCPIIEVYGRTFPVQEYFLEDCIQMTQFIPPPKD 593

  Fly   444 Y------------IDACC-------------VSVLQIHATQ-PL----------------GDILV 466
            .            .||.|             :|:.|::..: |.                |.:||
  Rat   594 KKKKDKEDDGGEDDDANCNLICGDEYGPETKLSMSQLNEKETPFELIEALLKYIETLNVPGAVLV 658

  Fly   467 FLTGQDEIETCQEVLHDRVKRLGSKIRELIVIPVYANLPSDMQAKIFEPTPPNARKVILATNIAE 531
            ||.|.:.|.|.|:.|.:. ...||  ....::|:::.:|.:.|.|:|:|.|....||||:|||||
  Rat   659 FLPGWNLIYTMQKHLENN-SHFGS--HRYQILPLHSQIPREEQRKVFDPVPDGVTKVILSTNIAE 720

  Fly   532 TSLTIDNIIYVIDPGFAKQNNFNSRTGMESLMVVPISKASANQRAGRAGRTAPGKCFRLYTAWAY 596
            ||:||::::||||....|...|.:...|.:...|..||.:..||.|||||..||.||.|.:. |.
  Rat   721 TSITINDVVYVIDSCKQKVKLFTAHNNMTNYATVWASKTNLEQRKGRAGRVRPGFCFHLCSR-AR 784

  Fly   597 KHELEDNTVPEIQRINLGNAVLMLKALGINDLIHF--DFLDPPPHETLVLALEQLYALGALNHHG 659
            ...||.:..||:.|..|....|.:|.|.:..:..|  ..::|||.:.::.|...|..|.||:.:.
  Rat   785 FDRLETHMTPEMFRTPLHEIALSIKLLRLGGIGQFLAKAIEPPPLDAVIEAEHTLRELDALDAND 849

  Fly   660 ELTKLGRRMAEFPVDPMMGKMLLASEKYKCSEEMVTIAA-------MLSVNSAIFYRPKDKIIHA 717
            |||.|||.:|:.|::|..|||::....:...:.:.||:|       .:|....:.|      ||.
  Rat   850 ELTPLGRILAKLPIEPRFGKMMIMGCIFYVGDAVCTISAATCFPEPFISEGKRLGY------IHR 908

  Fly   718 DTARKNFNHMHGDHLSLLQVYNQWAETDYS-----TQWCYENFIQYRSMKRARDVREQLVGLMQR 777
            :.|...|:    ||::||.|:..|.:...|     .::|.:..:...:::...:.:.||      
  Rat   909 NFAGNRFS----DHVALLSVFQAWDDARMSGEEAEIRFCEQKRLNMATLRMTWEAKVQL------ 963

  Fly   778 VEIDMVSCLPE 788
            .||.:.|..||
  Rat   964 KEILINSGFPE 974

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
l(2)37CbNP_609946.1 PTZ00121 <6..267 CDD:173412 61/324 (19%)
HrpA 251..>868 CDD:441249 189/608 (31%)
Dhx9NP_001382485.1 DSRM_DHX9_rpt1 3..71 CDD:380683
DSRM_DHX9_rpt2 181..255 CDD:380684 10/74 (14%)
DEXHc_DHX9 333..566 CDD:350730 83/264 (31%)
HrpA 391..>889 CDD:441249 167/504 (33%)
OB_NTP_bind 997..1076 CDD:400182
Blue background indicates that the domain is not in the aligned region.

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