DRSC/TRiP Functional Genomics Resources

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Protein Alignment l(2)37Cb and Dhx16

DIOPT Version :9

Sequence 1:NP_609946.1 Gene:l(2)37Cb / 35192 FlyBaseID:FBgn0086444 Length:894 Species:Drosophila melanogaster
Sequence 2:NP_997661.1 Gene:Dhx16 / 294232 RGDID:1302963 Length:1044 Species:Rattus norvegicus


Alignment Length:901 Identity:595/901 - (66%)
Similarity:739/901 - (82%) Gaps:19/901 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 SGKNRKRTASSSSSGEEPDSEEE------SRLKDLQERDEFASRLKKRDDDRTRNVVDSTGGRRA 60
            ||| ||...|.|.:.|:|.||:|      .||:||:|||.||.|:::||.||||||::.: .::|
  Rat   144 SGK-RKTGGSKSPTEEKPASEDEWERTERERLQDLEERDAFAERVRQRDKDRTRNVLERS-DKKA 206

  Fly    61 IEEATKRLKLEHEDRDKIVPHLRLQSRRQYLEKRKDDKVAELEADILDDEYLFDESVLTKREKEE 125
            .|||.||||:..|||..:||.||.:|||:||.||:.:|:.:|||::.|:|.||.:..|::.|:.|
  Rat   207 YEEAQKRLKMAEEDRKAMVPELRKKSRREYLAKREREKLEDLEAELADEEVLFGDVELSRHERRE 271

  Fly   126 REYKKQLLNIAKEHEKARELERIQ---RYNMPQDLKKGERSEYVEVDEFEK-QPNSEQKKWEAEQ 186
            .:||:::.::|:|:..|.|.|:::   ||:||:: .:|:.:...::.|.|. .|..||::||..:
  Rat   272 LKYKRRVRDLAREYRAAGEQEKLEATNRYHMPKE-TRGQPARATDIVEEESGAPGEEQRRWEEAR 335

  Fly   187 LASARFHFGAKDAKAEE-EYELLL--DDQIDFIQALTLDGSREKSSSRQPELTEKERKRLTLDET 248
            |.:|...|||:||.|:| :|:|:|  |:.|:|::|..|.|..|.||.  |.|:.:.:::.::...
  Rat   336 LDAASLKFGARDAAAQEPQYQLVLEEDETIEFVRAAQLQGDEEPSSG--PPLSAQAQQKESIQAV 398

  Fly   249 RRSLPVYPFKEDLIAAVKEHQVLIIEGETGSGKTTQVPQYLVEAGFTKDKKMIGCTQPRRVAAMS 313
            ||||||:||:|:|:.|:..|||||||||||||||||:||||.|.|:||....|.|||||||||||
  Rat   399 RRSLPVFPFREELLTAIANHQVLIIEGETGSGKTTQIPQYLFEEGYTKKGMKIACTQPRRVAAMS 463

  Fly   314 VAARVAEEMGVKLGNEVGYSIRFEDCTSDRTILKYMTDGTLHREFLSEPDLASYSVMIIDEAHER 378
            ||||||.|||||||||||||||||||||:||:|:|||||.|.||||||||||||||:::||||||
  Rat   464 VAARVAREMGVKLGNEVGYSIRFEDCTSERTVLRYMTDGMLLREFLSEPDLASYSVVMVDEAHER 528

  Fly   379 TLHTDILFGLVKDIARFRPELKLLISSATLDAEKFSAFFDDAPIFRIPGRRYPVDIFYTKAPEAD 443
            ||||||||||:||:||||||||:|::|||||..:|||||||||:|||||||:|||||||||||||
  Rat   529 TLHTDILFGLIKDVARFRPELKVLVASATLDTARFSAFFDDAPVFRIPGRRFPVDIFYTKAPEAD 593

  Fly   444 YIDACCVSVLQIHATQPLGDILVFLTGQDEIETCQEVLHDRVKRLGSKIRELIVIPVYANLPSDM 508
            |::||.|||||||.|||.||||||||||:|||...|:|.||.:|||||||||:|:|:||||||||
  Rat   594 YLEACVVSVLQIHVTQPPGDILVFLTGQEEIEAACEMLQDRCRRLGSKIRELLVLPIYANLPSDM 658

  Fly   509 QAKIFEPTPPNARKVILATNIAETSLTIDNIIYVIDPGFAKQNNFNSRTGMESLMVVPISKASAN 573
            ||:||:||||.||||::|||||||||||:.||||:||||.||.::|.|||||||.|.|.||||||
  Rat   659 QARIFQPTPPGARKVVVATNIAETSLTIEGIIYVLDPGFCKQKSYNPRTGMESLTVTPCSKASAN 723

  Fly   574 QRAGRAGRTAPGKCFRLYTAWAYKHELEDNTVPEIQRINLGNAVLMLKALGINDLIHFDFLDPPP 638
            ||||||||.|.||||||||||||:||||:.|||||||.:|||.||:||:|||:||:|||||||||
  Rat   724 QRAGRAGRVAAGKCFRLYTAWAYQHELEETTVPEIQRTSLGNVVLLLKSLGIHDLMHFDFLDPPP 788

  Fly   639 HETLVLALEQLYALGALNHHGELTKLGRRMAEFPVDPMMGKMLLASEKYKCSEEMVTIAAMLSVN 703
            :|||:||||||||||||||.||||..||:|||.|||||:.||:||||||.||||::|:|||||||
  Rat   789 YETLLLALEQLYALGALNHLGELTTSGRKMAELPVDPMLSKMILASEKYSCSEEILTVAAMLSVN 853

  Fly   704 SAIFYRPKDKIIHADTARKNFNHMHGDHLSLLQVYNQWAETDYSTQWCYENFIQYRSMKRARDVR 768
            ::||||||||::|||.||.||....||||.||.||.||||:.||:|||||||:|:|||:||||||
  Rat   854 NSIFYRPKDKVVHADNARVNFFLPGGDHLVLLNVYTQWAESGYSSQWCYENFVQFRSMRRARDVR 918

  Fly   769 EQLVGLMQRVEIDMVSCLPETVNVRKAATAGYFYHVARLSKGGHYKTIKHNQTVMIHPNSSLFEE 833
            |||.||::|||:.:.||..:.|.||||.|:|||||.|||::.| |:|:|..|||.|||||||||:
  Rat   919 EQLEGLLERVEVGLTSCQGDYVRVRKAITSGYFYHTARLTRSG-YRTVKQQQTVFIHPNSSLFEQ 982

  Fly   834 LPRWVLYHELVFTSKEYMRQVIEIESKWLLEVAPHYYKAKELEDSTNKKMPKVAGR 889
            .|||:||||||.|:||:||||:||||.|||||||||||||||||...|||||..|:
  Rat   983 QPRWLLYHELVLTTKEFMRQVLEIESSWLLEVAPHYYKAKELEDPHAKKMPKKVGK 1038

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
l(2)37CbNP_609946.1 HrpA 222..867 CDD:224557 478/644 (74%)
DEXDc 269..408 CDD:238005 115/138 (83%)
HELICc 491..581 CDD:197757 70/89 (79%)
HA2 651..735 CDD:214852 60/83 (72%)
OB_NTP_bind 770..869 CDD:285018 66/98 (67%)
Dhx16NP_997661.1 DEXDc 402..584 CDD:214692 145/181 (80%)
DEXDc 419..558 CDD:238005 115/138 (83%)
HELICc 583..740 CDD:238034 122/156 (78%)
HA2 801..885 CDD:214852 60/83 (72%)
OB_NTP_bind 920..1018 CDD:285018 66/98 (67%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166346541
Domainoid 1 1.000 200 1.000 Domainoid score I2959
eggNOG 1 0.900 - - E1_COG1643
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H2658
Inparanoid 1 1.050 1194 1.000 Inparanoid score I179
OMA 1 1.010 - - QHG53574
OrthoDB 1 1.010 - - D113216at33208
OrthoFinder 1 1.000 - - FOG0000059
OrthoInspector 1 1.000 - - oto97295
orthoMCL 1 0.900 - - OOG6_100085
Panther 1 1.100 - - LDO PTHR18934
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X141
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1514.810

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