Sequence 1: | NP_609946.1 | Gene: | l(2)37Cb / 35192 | FlyBaseID: | FBgn0086444 | Length: | 894 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001156485.1 | Gene: | Ythdc2 / 240255 | MGIID: | 2448561 | Length: | 1445 | Species: | Mus musculus |
Alignment Length: | 1136 | Identity: | 277/1136 - (24%) |
---|---|---|---|
Similarity: | 450/1136 - (39%) | Gaps: | 370/1136 - (32%) |
- Green bases have known domain annotations that are detailed below.
Fly 56 GGRRAIEEATKRLKLEHEDRDKIVPHLRLQSRRQYLEKRKDDKVAELEADILDDEYLFDESVLTK 120
Fly 121 REKEEREYKKQLLNIAKEHEKARELERIQRYNMPQDLKKGE-RSEYVEVDEFEKQPNSEQKKWEA 184
Fly 185 EQLASARFHFGAKDA----------KAEEEYELLLDDQIDFIQALTLDGSRE--KSSSRQ----P 233
Fly 234 ELTEKERKRLTLDETRRSLPVYPFKEDLIAAVKEHQVLIIEGETGSGKTTQVPQYLVEAGFTKD- 297
Fly 298 KKMIGCTQPRRVAAMSVAARVAEEMGVKLGNEVGYSIRFEDCTSDRTILKYMTDGTLHREFLS-E 361
Fly 362 PDLASYSVMIIDEAHERTLHTDILFGLVKDIARFRPELKLLISSATLDAEKFSAFFDDAPIFRIP 426
Fly 427 GRRYPV----------------------------------------------------------- 432
Fly 433 ------------DIFYTKAPEADY----------IDAC--------------------------- 448
Fly 449 -------------------------------------------------------CVSVLQIHAT 458
Fly 459 Q-------------------------------------------------------PLGDILVFL 468
Fly 469 TGQDEIETCQEVLHDRV----KRLGSKIRELIVIPVYANLPSDMQAKIFEPTPPNARKVILATNI 529
Fly 530 AETSLTIDNIIYVIDPGFAKQNNFNSRTGMESLMVVPISKASANQRAGRAGRTAPGKCFRLYTAW 594
Fly 595 AYKHELEDNTVPEIQRINLGNAVLMLKALGINDLIHFDFL----DPPPHETLVLALEQLYALGAL 655
Fly 656 NHHGELTKLGRRMAEFPVDPMMGKMLLASEKYKCSEEMVTIAAMLSVNSAIFYRPKDKII----- 715
Fly 716 ----HADTARKNFN-HMHGDHLSLLQVYNQW--AETD-YSTQWCYENFIQYRSMKRARDVREQLV 772
Fly 773 GLMQRV---------EIDMVSCLPETVNVRKAA-TAGYFYHVARLSKGGHYKTIKHNQTVMIHPN 827
Fly 828 SSL----FEELP--------------RWVLYHE---------------------LVFTSKEYM-R 852
Fly 853 QVIEIESKWLLEVAPHYYKAKELEDSTNKKM 883 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
l(2)37Cb | NP_609946.1 | HrpA | 222..867 | CDD:224557 | 235/941 (25%) |
DEXDc | 269..408 | CDD:238005 | 61/140 (44%) | ||
HELICc | 491..581 | CDD:197757 | 36/89 (40%) | ||
HA2 | 651..735 | CDD:214852 | 28/93 (30%) | ||
OB_NTP_bind | 770..869 | CDD:285018 | 27/148 (18%) | ||
Ythdc2 | NP_001156485.1 | Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1..50 | 4/7 (57%) | |
R3H_DEXH_helicase | 61..119 | CDD:100077 | 20/96 (21%) | ||
DEXDc | 225..364 | CDD:238005 | 59/138 (43%) | ||
DEAH box | 331..334 | 2/2 (100%) | |||
ANK | 502..587 | CDD:238125 | 2/84 (2%) | ||
ANK repeat | 520..552 | CDD:293786 | 0/31 (0%) | ||
ANK 1 | 521..553 | 0/31 (0%) | |||
Ank_4 | 524..574 | CDD:290365 | 1/49 (2%) | ||
ANK 2 | 554..586 | 2/31 (6%) | |||
ANK repeat | 554..582 | CDD:293786 | 2/27 (7%) | ||
Helicase_C | 625..757 | CDD:278689 | 50/135 (37%) | ||
HA2 | 831..916 | CDD:214852 | 28/92 (30%) | ||
OB_NTP_bind | 954..1081 | CDD:285018 | 25/126 (20%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1179..1303 | ||||
YTH | 1304..1434 | CDD:282058 | |||
N6-methyladenosine binding. /evidence=ECO:0000250|UniProtKB:Q9Y5A9 | 1309..1311 | ||||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_COG1643 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.900 |