DRSC/TRiP Functional Genomics Resources

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Protein Alignment l(2)37Cb and DHX30

DIOPT Version :9

Sequence 1:NP_609946.1 Gene:l(2)37Cb / 35192 FlyBaseID:FBgn0086444 Length:894 Species:Drosophila melanogaster
Sequence 2:XP_011531792.1 Gene:DHX30 / 22907 HGNCID:16716 Length:1265 Species:Homo sapiens


Alignment Length:962 Identity:269/962 - (27%)
Similarity:425/962 - (44%) Gaps:180/962 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 SSSSGEEPDSEEESRLKD-LQERDEFASRLKKRDDDRTRNVVDSTGGRRAIEEATKRLKLEHEDR 75
            |.|.|.|.:.:||..|:: ..:..:|.|..::   |....:.||.|.           ..|..|.
Human   253 SRSLGREEEEDEEEELEEGTIDVTDFLSMTQQ---DSHAPLRDSRGS-----------SFEMTDD 303

  Fly    76 DKIVPHLRLQSRRQY-LEKRKDDKVAELEADILDDEYLFD-ESVLTK------------------ 120
            |..:     ::..|: |.|....||.::.......:.|.. .:|.||                  
Human   304 DSAI-----RALTQFPLPKNLLAKVIQIATSSSTAKNLMQFHTVGTKTKLSTLTLLWPCPMTFVA 363

  Fly   121 --REKEEREYKKQLLNIAKEHEKARELERIQRYNMPQDLKKGERSEYVEVDEFEKQPNSEQ---- 179
              |.|.|.|.|...|..    :|.:.|..:.|.|.|........:...|:.|.:::|.:.|    
Human   364 KGRRKAEAENKAAALAC----KKLKSLGLVDRNNEPLTHAMYNLASLRELGETQRRPCTIQVPEP 424

  Fly   180 --KKWEAEQLASARF--HFGAKDAKAEEEYELLLDDQIDFIQALTLD-GSREKSSSRQP--ELTE 237
              :|.|.       |  |:..:.:....|..|..||    |..|..| |......:.:|  .|.|
Human   425 ILRKIET-------FLNHYPVESSWIAPELRLQSDD----ILPLGKDSGPLSDPITGKPYVPLLE 478

  Fly   238 KERKRLT---LDETRR---------SLPVYPFKEDLIAAVKEHQVLIIEGETGSGKTTQVPQYLV 290
            .|..||:   |:..||         .|||.|.::.::.|:::|.|::|.|:||.||||::||.|:
Human   479 AEEVRLSQSLLELWRRRGPVWQEAPQLPVDPHRDTILNAIEQHPVVVISGDTGCGKTTRIPQLLL 543

  Fly   291 EAGFTKDKKM---IGCTQPRRVAAMSVAARVAEEMGVKLGNEVGYSIRFEDCTSDR-TILKYMTD 351
            |...|:.:..   :..|||||::|:|||.||:.|:|..|...||:.:|.|.....| ..|.:.|.
Human   544 ERYVTEGRGARCNVIITQPRRISAVSVAQRVSHELGPSLRRNVGFQVRLESKPPSRGGALLFCTV 608

  Fly   352 GTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIARFRPELKLLISSATLDAEKFSAF 416
            |.|.|:..|.|.|...|.:|:||.|||.::||.|..|:|.:.|..|.|:|::.|||.|.|:||.:
Human   609 GILLRKLQSNPSLEGVSHVIVDEVHERDVNTDFLLILLKGLQRLNPALRLVLMSATGDNERFSRY 673

  Fly   417 FDDAPIFRIPGRRYPVDIFY-----TKAPEADYI---------DACCVS-------VLQIHATQP 460
            |...|:.::||..|||...|     .|..:..|:         |.|.:.       ||.|.|...
Human   674 FGGCPVIKVPGFMYPVKEHYLEDILAKLGKHQYLHRHRHHESEDECALDLDLVTDLVLHIDARGE 738

  Fly   461 LGDILVFLTGQDEIETCQEVLHDRVKRLGSKIRELIVIPVYANLPSDMQAKIFEPTPPNARKVIL 525
            .|.||.||.|..||:..|:.|.:   .||....:.:::||::|:|...|..||:..|...||::|
Human   739 PGGILCFLPGWQEIKGVQQRLQE---ALGMHESKYLILPVHSNIPMMDQKAIFQQPPVGVRKIVL 800

  Fly   526 ATNIAETSLTIDNIIYVIDPGFAKQNNFNSRTGMESLMVVPISKASANQRAGRAGRTAPGKCFRL 590
            ||||||||:||::|::|:|.|..|:..::.:|.:..|..|.:|:|:..||.|||||...|..:.|
Human   801 ATNIAETSITINDIVHVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRRGRAGRCQSGFAYHL 865

  Fly   591 YTAWAYKHELEDNT---VPEIQRINLGNAVLMLKALGINDLIHF------DFL----DPPPHETL 642
            :.    :..||...   ||||.|..|.|.||..|       ||.      :||    |.|..:.:
Human   866 FP----RSRLEKMVPFQVPEILRTPLENLVLQAK-------IHMPEKTAVEFLSKAVDSPNIKAV 919

  Fly   643 VLALEQLYALGALNHHGELTKLGRRMAEFPVDPMMGKMLLASEKYKCSEEMVTIAAMLS---VNS 704
            ..|:..|..:|.|:....||.||:|:|....||.:.|.::.:..::|...::.:.:.|:   .:|
Human   920 DEAVILLQEIGVLDQREYLTTLGQRLAHISTDPRLAKAIVLAAIFRCLHPLLVVVSCLTRDPFSS 984

  Fly   705 AIFYRPKDKIIHADTARKNFNHMHG-DHLSLLQVYNQWAET----DYSTQWCY--ENFIQYRSMK 762
            ::..|.:     .|..:...:|..| |||:.::....|.|.    |.|::..|  ||.:...|::
Human   985 SLQNRAE-----VDKVKALLSHDSGSDHLAFVRAVAGWEEVLRWQDRSSRENYLEENLLYAPSLR 1044

  Fly   763 RARDVREQ---------LVGLMQRVEIDMVSC---LPETVNVRKAATAGYFYHVARLSKG----- 810
            ....:.:|         |||......:....|   ..|...|:....||.:.::.::.:|     
Human  1045 FIHGLIKQFSENIYEAFLVGKPSDCTLASAQCNEYSEEEELVKGVLMAGLYPNLIQVRQGKVTRQ 1109

  Fly   811 GHYKTIKHNQTVMIHPNSSLFEELPRWVLYHELVFTSKEYMRQVIEIESKWL 862
            |.:|           |||..:......:|.|:....     |:...:.|:||
Human  1110 GKFK-----------PNSVTYRTKSGNILLHKSTIN-----REATRLRSRWL 1145

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
l(2)37CbNP_609946.1 HrpA 222..867 CDD:224557 219/721 (30%)
DEXDc 269..408 CDD:238005 59/142 (42%)
HELICc 491..581 CDD:197757 36/89 (40%)
HA2 651..735 CDD:214852 21/87 (24%)
OB_NTP_bind 770..869 CDD:285018 21/110 (19%)
DHX30XP_011531792.1 HrpA 494..>1143 CDD:224557 206/683 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1643
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

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