DRSC/TRiP Functional Genomics Resources

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Protein Alignment l(2)37Cb and smgl-2

DIOPT Version :10

Sequence 1:NP_609946.1 Gene:l(2)37Cb / 35192 FlyBaseID:FBgn0086444 Length:894 Species:Drosophila melanogaster
Sequence 2:NP_001294374.1 Gene:smgl-2 / 177135 WormBaseID:WBGene00021365 Length:1089 Species:Caenorhabditis elegans


Alignment Length:929 Identity:253/929 - (27%)
Similarity:410/929 - (44%) Gaps:206/929 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    96 DDKVAELEADILDDEYLFDESVLTKREKEEREYKKQLLNIAKEHEKARELERIQRY-NMPQDLKK 159
            |.:..|.....|...:|.||...:...:.|:..:::|::..:        :.||.| |.....:|
 Worm     5 DQEEYEKHRGALFRHFLPDEPGTSGNRRGEKSTEQELIDTQR--------KSIQSYFNRFFRERK 61

  Fly   160 GERSEYVEVDEF--------EKQPNSEQKKWEAEQLASARFHFGAKDAKAEEEYELLLDDQIDFI 216
            ||.:::.:|:..        :......:.:::.|.|.......|.........:|......:.|.
 Worm    62 GETNDHFDVNRVKFDDLGIPQDTGGLNRIRFKGENLGIMPTQLGHITPWLYRHFEYAYHVALQFN 126

  Fly   217 QALTLDGSREKSSSRQPELTEKERKRLTLDETRRSLPVYPFKEDLIAAVKEHQVLIIEGETGSGK 281
            |                  .:|.:|...|.:.::.||:.....:::..:|.:||||:.|:||.||
 Worm   127 Q------------------HQKFQKLQKLRKLQKELPIAERAGEIVELLKTNQVLIVAGDTGCGK 173

  Fly   282 TTQVPQYLVEAGFTKDKKMIGCTQPRRVAAMSVAARVAEEMGVKLGNEVGYSIRFEDCTSDRTIL 346
            :|||||||::||||.    :.||||||:|..::|.|||.|...:.|:||.:.||||...|.:|.|
 Worm   174 STQVPQYLLKAGFTG----VACTQPRRIACTALARRVAYETLNQYGSEVAFQIRFETTKSQKTKL 234

  Fly   347 KYMTDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIARFRPELKLLISSATLDAE 411
            .::|:|.|.|:...:..|..|:|:|:||.|||.|.:|:|.||::|:...|.:|||::.|||::.:
 Worm   235 LFLTEGLLLRQMEKDSLLEKYNVIILDEVHERHLTSDLLIGLLRDLCTKRDDLKLILMSATINLD 299

  Fly   412 KFSAFFDDAPIFRIPGRRYPVDIFYTKAPEADYIDACCVSVLQIHATQP---------------- 460
            .|..:|:.||:.::|||.:|:|:.:  .|...:||.   |..:.|...|                
 Worm   300 LFKGYFEGAPVVQVPGRLFPIDVRW--HPIKQFIDQ---SDKKTHKIDPEPYLKILELIDKQFPS 359

  Fly   461 --LGDILVFLTGQDEIETCQEVLHDRVKRLGSKIRELIVIPVYANLPSDMQAKIFEPTPPNARKV 523
              .||.|:||.|..||    .::.:.:|.........|::.:::.|..:.|.|:|:..|...||.
 Worm   360 TQRGDALIFLNGVAEI----SMVAEHLKNYAELTNGWIILMLHSTLSVEEQDKVFDQAPVGIRKC 420

  Fly   524 ILATNIAETSLTIDNIIYVIDPGFAKQNNFNSRTGMESLMVVPISKASANQRAGRAGRTAPGKCF 588
            ||:||:||||:|||.|.:|||.|..........||.:.|....:||||||||.||||||.||.|:
 Worm   421 ILSTNVAETSVTIDGIRFVIDSGKVNLIKHEPGTGTQKLTEFWVSKASANQRKGRAGRTGPGICY 485

  Fly   589 RLYTAWAYKHELEDNTVPEIQRINLGNAVLMLKALGIN-DLIHFDFLDPPPHETLVLALEQLYAL 652
            |||:...:: :::|.||.||.|::|....|.:.:|.:. |...|.|::.|..:.|...||.|...
 Worm   486 RLYSQEQFE-KMDDFTVSEINRVSLQEMALKMISLNLGLDPRTFPFIEKPSEDVLNEGLEVLKFQ 549

  Fly   653 GAL-NHHGE---LTKLGRRMAEFPVDPMMGKMLLASEKYKC----SEEMVTIAAMLSVNSAI--- 706
            ..| :..|:   ||.||..:::.||:..:.|||:    |.|    .|.|:|:||.|||.|..   
 Worm   550 RVLRSDRGDILTLTALGNMVSKLPVEVPIAKMLV----YGCVVDELEVMLTVAAGLSVQSPFTNR 610

  Fly   707 FYRPKDKIIHADTARKNFNHMHGDHLSLLQVYNQW----AETDYSTQWCYENFI----------- 756
            .||..:.:    ..|.:.....||..:|:.::.:|    |....:.:|..||.|           
 Worm   611 SYRELEIV----ERRASLTSPLGDPFTLISIFREWVLQKAFEGTARRWTMENGIDEHRLYEISKL 671

  Fly   757 --QYRSM---------------------------------------KRARDVREQLVGLMQ---- 776
              |||.:                                       :|..|.|::::...:    
 Worm   672 RAQYRQILEDAGLVEKASAAETGEDDSRQRRIDQGEKRKLFDLKKSQRNNDRRQKVLNANKHFDK 736

  Fly   777 ----------RVEIDMVSCLPETV------------NVRKA--------------ATAGYFYHVA 805
                      ..|.|.:....:||            |:||.              ..||.:.:.:
 Worm   737 ILEDKEEEDLEAEKDPLKADVKTVEFLLSHKQRDVENIRKTHKISRKTAEVVRVIIAAGLYPNFS 801

  Fly   806 RLSKGGHY----KTIKHNQT---VMIHPNSSL----------------FEELPRWVLYHELVFTS 847
            .|.....|    :...|.:.   ..||||||:                |..|.:...|..|:.|:
 Worm   802 ILDPVNKYGYGQEMFTHTRLKPFTQIHPNSSIAQYHPETIDPRQGSDGFSRLHQIPFYGLLLETT 866

  Fly   848 KEYMRQVIEIESKWLLEVA 866
            |.|:..|:.:.:.:.|.||
 Worm   867 KPYICNVMPVPAVYTLLVA 885

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
l(2)37CbNP_609946.1 PTZ00121 <6..267 CDD:173412 27/179 (15%)
HrpA 251..>868 CDD:441249 228/765 (30%)
smgl-2NP_001294374.1 HrpA 143..>694 CDD:441249 196/572 (34%)
OB_NTP_bind 788..888 CDD:400182 22/98 (22%)

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