DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment l(2)37Cb and LOC110438502

DIOPT Version :9

Sequence 1:NP_609946.1 Gene:l(2)37Cb / 35192 FlyBaseID:FBgn0086444 Length:894 Species:Drosophila melanogaster
Sequence 2:XP_021326722.1 Gene:LOC110438502 / 110438502 -ID:- Length:511 Species:Danio rerio


Alignment Length:542 Identity:204/542 - (37%)
Similarity:304/542 - (56%) Gaps:54/542 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly   349 MTDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIARFRPE-----LKLLISSATL 408
            ||||.|.||.:.:|.|..|:|:|:|||||||:|||:|||:||...|.|.|     ||:::.|||:
Zfish     1 MTDGMLLREAIGDPLLLRYTVVILDEAHERTVHTDVLFGVVKAAQRRRLEQNRIPLKVVVMSATM 65

  Fly   409 DAEKFSAFFDDAPIFRIPGRRYPVDIFYTKAPEADYIDACCVSVLQIHATQPLG-DILVFLTGQD 472
            |.:.||.:|:.:|:..:.||::|:.|:|||.|::||:.|..||:.|||...|.. |||||||||:
Zfish    66 DVDLFSQYFNKSPVLYLEGRQHPIQIYYTKQPQSDYLQAALVSIFQIHQEAPSSHDILVFLTGQE 130

  Fly   473 EIETCQEVLHDRVKRLGSKIRELIVIPVYANLPSDMQAKIFEPTPPNARKVILATNI---AETSL 534
            |||.......|..|.|......:.|:|:||:||...|.::|.|.|    ||...|:.   ..|..
Zfish   131 EIEALARTCRDISKHLPDTSGSMTVVPLYASLPPAQQMRVFLPAP----KVSHTTHTHTHTHTQY 191

  Fly   535 TIDNIIYVIDPGFAKQNNFNSR--TGMESLMVVPISKASANQRAGRAGRTAPGKCF-RLYTAWAY 596
            |:...|. |...:|..:..|..  .|:| |..||.:..|               |. :||:..  
Zfish   192 TLKQSIQ-IHTHYAHAHYINMLYCNGVE-LCRVPQAVCS---------------CVCQLYSLC-- 237

  Fly   597 KHELEDNTVPEIQRINLGNAVLMLKALGINDLIHFDFLDPPPHETLVLALEQLYALGALNH---H 658
                       :.|.||.:.||.|.|||:.|:::|||:..|..|::..|:|||..|||::.   |
Zfish   238 -----------VCRCNLASVVLQLLALGVPDVLNFDFVSKPSPESMRTAVEQLCILGAVDRKDDH 291

  Fly   659 GELTKLGRRMAEFPVDPMMGKMLLASEKYKCSEEMVTIAAMLSVNSAIFYRP--KDKIIHADTAR 721
            ..||.||::||.||::|...|.||.|..:.|:||::||.::|||:|.::..|  :|::|   :.|
Zfish   292 VSLTPLGKKMACFPLEPRFSKTLLISPDFSCAEEILTIISLLSVDSVLYNPPARRDEVI---SVR 353

  Fly   722 KNFNHMHGDHLSLLQVYNQWAETDYSTQWCYENFIQYRSMKRARDVREQLVGLMQRVEIDMVSCL 786
            |.|....|||::||.:|..:.:...:..||.|||:..|:|....:||.||..:..::.:.:.|.:
Zfish   354 KKFISSEGDHITLLNIYRAFKKVSGNKDWCRENFVNSRNMGLVGEVRAQLRDICIKMNLKLESSV 418

  Fly   787 PETVNVRKAATAGYFYHVARLSKGGHYKTIKHNQTVMIHPNSSLFEELPRWVLYHELVFTSKEYM 851
            .:..|||:....|.|...|.|...|.|..:..:|.|.|||:|.||:..|..||::||:.||:.||
Zfish   419 CDLANVRRCLAHGLFMSAAELQPDGSYVALDTHQPVSIHPSSVLFQARPVCVLFNELLHTSRCYM 483

  Fly   852 RQVIEIESKWLLEVAPHYYKAK 873
            |.:..|::.||.|.||.|::.|
Zfish   484 RDLCLIQTDWLHEAAPEYFRRK 505

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
l(2)37CbNP_609946.1 HrpA 222..867 CDD:224557 200/534 (37%)
DEXDc 269..408 CDD:238005 34/63 (54%)
HELICc 491..581 CDD:197757 25/94 (27%)
HA2 651..735 CDD:214852 35/88 (40%)
OB_NTP_bind 770..869 CDD:285018 36/98 (37%)
LOC110438502XP_021326722.1 HrpA 1..496 CDD:224557 199/531 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D354219at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.010

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