DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment l(2)37Cb and Dhx32

DIOPT Version :9

Sequence 1:NP_609946.1 Gene:l(2)37Cb / 35192 FlyBaseID:FBgn0086444 Length:894 Species:Drosophila melanogaster
Sequence 2:NP_001272959.1 Gene:Dhx32 / 101437 MGIID:2141813 Length:751 Species:Mus musculus


Alignment Length:729 Identity:234/729 - (32%)
Similarity:394/729 - (54%) Gaps:55/729 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly   167 EVDEFE-KQPN-SEQKKWEAEQLASARFHFGAKDAKAEEEYELLLDDQIDFIQALTLDGSREKSS 229
            |:||.| ..|| |.:|::..|.|.|         :..:||..|..:|    ::....||.  ..|
Mouse     7 EMDEEELDHPNASPEKRYFPESLDS---------SDGDEEGVLACED----LELNPFDGL--PYS 56

  Fly   230 SRQPELTEKERKRLTLDETRRSLPVYPFKEDLIAAVKEHQVLIIEGETGSGKTTQVPQYLVEAGF 294
            ||..:|.::          |..||::..|...:.::.::||:::.|::..||::||||:..|...
Mouse    57 SRYYKLLKE----------REELPIWKEKYSFMESLLQNQVVVVSGDSKCGKSSQVPQWCAEYCL 111

  Fly   295 TKDKKMIG--CTQPRRVAAMSVAARVAEEMGVKLGNEVGYSIRFEDCTSDRTILKYMTDGTLHRE 357
            :...:..|  |||..:..|:.:|.|||:||.|.:|:||||.|.||:|.:..|||:|.||..|.||
Mouse   112 SIHYQHGGVICTQAHKQTAVQLALRVADEMDVNIGHEVGYVIPFENCCTTETILRYCTDDMLQRE 176

  Fly   358 FLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIARFRPELKLLISSATLDAEKFSAFFDDAPI 422
            .:|.|.|.||.|:|:|:.|||:|.||:|.||:||:...||||||:::.:.|...|.|:::.|.|:
Mouse   177 MMSNPFLGSYGVIILDDVHERSLATDVLLGLLKDVLLARPELKLIVNCSPLLTSKLSSYYGDVPV 241

  Fly   423 FRIPGRRYPVDIFYTKAPEADYIDACCVSVLQIHATQPLGDILVFLTGQDEIETCQEVLHDRVKR 487
            ..: ..::||::.|....:.|..::....:.:||.:...||::|||..:.:||...|::......
Mouse   242 IEV-RNKHPVEVVYLSGAQKDSFESVIRLIFEIHRSGEKGDVVVFLACEQDIEKTYELVCQEGSN 305

  Fly   488 LGSKIRELIVIPVYANLPSDMQAKIFEPTPPN-------ARKVILATNIAETSLTIDNIIYVIDP 545
            |...:.:|:|||:|   |.: :..:|.|....       .|:|:|.|:..|:.:....:.:|||.
Mouse   306 LNPDVGDLVVIPLY---PKE-KCSLFRPVDETEKRCQVYQRRVVLTTSCGESLIWSHTVKFVIDV 366

  Fly   546 GFAKQNNFNSRTGMESLMVVPISKASANQRAGRAGRTAPGKCFRLYTAWAYKHELEDNTVPEIQR 610
            |..::..:|.|....||::.|||::.|..|....|.:..||.|.|||......::......|:|.
Mouse   367 GLERRQVYNPRIRANSLVLQPISQSQAEIRKQLLGSSPSGKLFCLYTEEFASKDMRPLKPAEMQE 431

  Fly   611 INLGNAVLMLKALGINDLIHFDFLDPPPHETLVLALEQLYALGALNHHGELTKLGRRMAEFPVDP 675
            .||.:.||.:|.:.|..|...||::.|..|:|:.|||.|..|.||::.|.|::.|..|:|||:||
Mouse   432 ANLTSMVLFMKRVDIAGLGRCDFMNRPAPESLMQALEDLDYLAALDNDGNLSEFGIIMSEFPLDP 496

  Fly   676 MMGKMLLASEKYKCSEEMVTIAAMLSVNSAIFYRPKDKIIHADTARKNFNHMHGDHLSLLQVYNQ 740
            .:.|.:|||.::.|.:||:|||||::..|...:.|......|.|..|.|.|..|||.:|:.|||.
Mouse   497 QLSKSILASCEFDCVDEMLTIAAMVTAPSCFLHVPHGAEEAAVTCWKTFLHPEGDHFTLINVYNA 561

  Fly   741 WAETDYST-------QWCYENFIQYRSMKRARDVREQLVGLMQRVEIDMV----SCLPETVNVRK 794
            :.:|..::       .||::.|:...:::.|..:|.:|:.:::|:|:...    ......:|::|
Mouse   562 YQDTVLNSANEHCVEMWCHDCFLSCSALRMADVIRAELLEIIKRIELPYAEPAFGSKENGLNIKK 626

  Fly   795 AATAGYFYHVAR-LSKGGHYKTIKHNQTVMIHPNS--SLFEELPRWVLYHELVFTSKEYMRQVIE 856
            |..:|||..:|| :...|:|..:.|.|...:||.|  |:.:::|.|||:|:...:...|:|....
Mouse   627 ALLSGYFMQIARDVDGSGNYLMLTHKQVAQLHPLSSYSITKKMPEWVLFHQFSISENNYIRVASA 691

  Fly   857 IESKWLLEVAPHYY 870
            :..:..:::.|.||
Mouse   692 VSPELFMQLVPQYY 705

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
l(2)37CbNP_609946.1 HrpA 222..867 CDD:224557 216/667 (32%)
DEXDc 269..408 CDD:238005 65/140 (46%)
HELICc 491..581 CDD:197757 26/96 (27%)
HA2 651..735 CDD:214852 34/83 (41%)
OB_NTP_bind 770..869 CDD:285018 27/105 (26%)
Dhx32NP_001272959.1 HrpA 19..687 CDD:224557 224/697 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1643
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D113216at33208
OrthoFinder 1 1.000 - - FOG0000059
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.820

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