DRSC/TRiP Functional Genomics Resources

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Protein Alignment l(2)37Cb and dhx32

DIOPT Version :9

Sequence 1:NP_609946.1 Gene:l(2)37Cb / 35192 FlyBaseID:FBgn0086444 Length:894 Species:Drosophila melanogaster
Sequence 2:XP_031762010.1 Gene:dhx32 / 100495407 XenbaseID:XB-GENE-982113 Length:747 Species:Xenopus tropicalis


Alignment Length:725 Identity:233/725 - (32%)
Similarity:388/725 - (53%) Gaps:74/725 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly   198 DAKAEEEYELLLD---------DQIDFIQALTLDGSREKSSSRQPELTEKERKRLTLDETRRSLP 253
            |....||....||         |:::.::....||.  ..|||..:|.::          |..||
 Frog    13 DELISEEKSCCLDVTDSSDVEGDELNDLELNPFDGL--PYSSRFYKLLKE----------REDLP 65

  Fly   254 VYPFKEDLIAAVKEHQVLIIEGETGSGKTTQVPQYLVE---AGFTKDKKMIGCTQPRRVAAMSVA 315
            ::..|.|.:..:...||:::.....|||::|:||:..|   ||..:...:: |||..:..|:.:|
 Frog    66 IWKAKYDFLERLSNSQVVVVSAGPKSGKSSQIPQWCAEYCLAGHYQHGAVV-CTQAHKQTAVWLA 129

  Fly   316 ARVAEEMGVKLGNEVGYSIRFEDCTSDRTILKYMTDGTLHREFLSEPDLASYSVMIIDEAHERTL 380
            .|||:||.|.:|:||||.:.||:|.:..||.:|.||..|.||.:|.|.|:||.|:|||:.:||::
 Frog   130 MRVADEMDVNIGHEVGYIVPFENCCTSETIFRYCTDEMLLREMMSSPLLSSYGVVIIDDVYERSV 194

  Fly   381 HTDILFGLVKDIARFRPELKLLISSATLDAEKFSAFFDDAPIFRIPGRRYPVDIFYTKAPEADYI 445
            .||:|...:|.||..|||||::|.:....:....:::.:||:.... ..:.|:..||.:...||.
 Frog   195 STDVLLSCLKVIAVSRPELKVVIITCPALSGTLVSYYGNAPLVETE-NMHSVESVYTTSIPRDYF 258

  Fly   446 DACCVSVLQIHATQPLGDILVFLTGQDEIETCQEVLHDRVKRLGSKIRELIVIPVYAN------L 504
            .:....:.:||.|:..|||:|||..::||:...|.:......:..::.||:.|.:|.|      :
 Frog   259 HSTLRLLFEIHHTKEQGDIVVFLACEEEIKRAYEHIKQEALHMNPELGELVPIALYPNQSISDYI 323

  Fly   505 PSDMQAKIFEPTPPNA----RKVILATNIAETSLTIDNIIYVIDPGFAKQNNFNSRTGMESLMVV 565
            |       :|....|:    |||:|.|::.|:.:.:.||::|||.|..::..:|:|...||.:..
 Frog   324 P-------YEELDDNSKSPKRKVVLTTSLGESLIWMKNILFVIDVGIERRKVYNTRIRAESHVTQ 381

  Fly   566 PISKASANQRAGRAGRTAPGKCFRLYTAWAYKHELEDNTVPEIQRINLGNAVLMLKALGINDLIH 630
            ||||..|..|.......:.||.|.||.. .:.||::.....:::..||.:.||.||.:.|..|.|
 Frog   382 PISKVRAEMRKHILSSYSKGKLFCLYPE-DFAHEMKPFLTAKVEECNLISMVLFLKRMDIAGLAH 445

  Fly   631 FDFLDPPPHETLVLALEQLYALGALNHHGELTKLGRRMAEFPVDPMMGKMLLASEKYKCSEEMVT 695
            .||::.|..|:|:.|||.|..|.||::.|.|::.|..|:|||:||.:.|.:||:.::.|.:||:|
 Frog   446 CDFINRPDPESLMQALEDLDYLAALDNDGNLSEFGIIMSEFPLDPQLSKSILAACEFDCVDEMLT 510

  Fly   696 IAAMLSV-NSAIFYRPK-DKIIHADTARK-NFNHMHGDHLSLLQVYNQWAETDYST-------QW 750
            :|||::. |..|...|: :::|   ..|| .|:|..|||.:|:.:||::.:...|.       :|
 Frog   511 LAAMVTAPNCFIDSSPEAEELI---LIRKGKFSHPEGDHFTLINIYNEYEQMKRSNASQYDVEKW 572

  Fly   751 CYENFIQYRSMKRARDVREQLVGLMQRVEIDMVSCLP------ETVNVRKAATAGYFYHVARLSK 809
            |.::.:.:.:|:.||.:|.:|..:|:|:|:.:.:  |      ..:|::|:..:|||..:||...
 Frog   573 CQDHCLSFLAMEMARAIRNELADIMRRIELPLTA--PAFGSEENVINIKKSLLSGYFMQIARDVD 635

  Fly   810 G-GHYKTIKHNQTVMIHPNSSL-FEELPRWVLYHELVFTSKEYMRQVIEIESKWLLEVAPHYY-- 870
            | |:|..:.|.|...:||:|.. ..::|.||||||...:.:..:|.|.||.....:|..|.||  
 Frog   636 GLGNYIMLTHKQVGQLHPDSGFNGAKVPEWVLYHEFSVSERSCIRIVSEISPNMFMEFVPPYYFS 700

  Fly   871 -----KAKEL 875
                 :.|||
 Frog   701 NLPPSETKEL 710

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
l(2)37CbNP_609946.1 HrpA 222..867 CDD:224557 221/675 (33%)
DEXDc 269..408 CDD:238005 61/141 (43%)
HELICc 491..581 CDD:197757 30/99 (30%)
HA2 651..735 CDD:214852 33/86 (38%)
OB_NTP_bind 770..869 CDD:285018 33/106 (31%)
dhx32XP_031762010.1 HrpA 37..695 CDD:224557 221/684 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D113216at33208
OrthoFinder 1 1.000 - - FOG0000059
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.010

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