DRSC/TRiP Functional Genomics Resources

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Protein Alignment l(2)37Cb and dhx57

DIOPT Version :10

Sequence 1:NP_609946.1 Gene:l(2)37Cb / 35192 FlyBaseID:FBgn0086444 Length:894 Species:Drosophila melanogaster
Sequence 2:NP_001163976.1 Gene:dhx57 / 100124795 XenbaseID:XB-GENE-976876 Length:1180 Species:Xenopus tropicalis


Alignment Length:933 Identity:252/933 - (27%)
Similarity:406/933 - (43%) Gaps:229/933 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 ERDEFASRL---KKRDDDR------TRNVVDSTGGRRAIEEATKRLKLEHEDRDKIVPHLRLQSR 87
            |.|....||   ||:|.|:      .||:.............:| .:.:||     .|....:..
 Frog   281 EMDYLTKRLQKPKKKDSDKDLFQQMPRNICKYYMKGENCRFGSK-CRFKHE-----APKQNFKDE 339

  Fly    88 RQYLEKRKDDKVAELEADI-LDDEYLFDESVLTKREKEER----------EY-KKQLLNIAKEHE 140
            ........::.:.|||... .|::|.:...:|......|.          || .::.||||:..:
 Frog   340 SHLCANGNNNCLYELEVRFPKDNKYPYQAPLLAFYSVNENLSMGCRLHITEYLYEKALNIAQTSD 404

  Fly   141 KA-----------RELERI-----QRYNMPQDL-------------------------------- 157
            .|           .|:.::     .:|::|..|                                
 Frog   405 PAVYTLVSCLEDEDEIVKLLANTHHKYSIPPPLLLTATSDTRKNPVITINKPVAPDKPSLLSYPS 469

  Fly   158 --KKGERSEYVEVDEFEKQPN-----------SEQKKWEAEQLA------SARFHFGAKDAKAEE 203
              :||::...:::    .:||           ||....|.|..|      :.::.|.:..|.|.|
 Frog   470 GARKGQKPIKMDI----SKPNDTDEDSLDDLESESVLVENESYANLKKKQAKKYSFNSNKAVAAE 530

  Fly   204 EYELLLDDQIDFIQALTLDGSREKSSSRQPELTEKERKRLTLDETRRSLPVYPFKEDLIAAVKEH 268
                         .|......|.|.::|..:         ::.|.|:.||.:..::.::..:.::
 Frog   531 -------------NAKICKHYRAKKTTRNYQ---------SMLEERQKLPAWQKQDQILELLSKY 573

  Fly   269 QVLIIEGETGSGKTTQVPQYLVEA---GFTKDKKMIGCTQPRRVAAMSVAARVAEEMGVKLGNEV 330
            |||::.|.||.|||||:||::::|   |.......|.||||||::|:|||.|||:|...::|..|
 Frog   574 QVLVVSGMTGCGKTTQIPQFILDASLKGPPSHVSNIICTQPRRISAISVAERVAQERAERVGISV 638

  Fly   331 GYSIRFEDCTSDRTILKYMTDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIARF 395
            ||.||.|...|..|.|.|.|.|.|.|....:..|.:.:.:::||.||||..:|.|..::||:...
 Frog   639 GYQIRLESVKSAATRLLYCTTGVLLRRLEGDTTLQNVTHVVVDEVHERTEESDFLLLVLKDVMVL 703

  Fly   396 RPELKLLISSATLDAEKFSAFFDDAPIFRIPGRRYPVDIFYTK---------------------- 438
            ||:||:::.||||:||.||.:|.|.|:..||||.:|||.::.:                      
 Frog   704 RPDLKIILMSATLNAELFSCYFQDCPVLHIPGRTFPVDQYFLEDAIAKTRYVLEDGSPYQRSSKQ 768

  Fly   439 --APEA----------------------------------------------------------- 442
              .|::                                                           
 Frog   769 LPGPDSARGKKGNSYNELLDELEQQISSSLRIQDSKIVKDSVPDQQLNVKELSVRYNGISKSVIK 833

  Fly   443 ------------DYIDACCVSVLQIHATQPLGDILVFLTGQDEIETCQEVLHDRVKRLGSKIREL 495
                        |.|:|....::....:.|.|.:||||.|..||:|..:.|.........:.:..
 Frog   834 TLSSMDLDKINLDLIEALLEWIVNGDHSYPPGAVLVFLPGLAEIKTLYDQLQSNALFNNRRSKRC 898

  Fly   496 IVIPVYANLPSDMQAKIFEPTPPNARKVILATNIAETSLTIDNIIYVIDPGFAKQNNFNSRTGME 560
            ::.|::::|.||.|..:|...||...|:|::|||||||:|||:::||||.|..::..::....||
 Frog   899 VIYPLHSSLSSDEQQSVFLKPPPGVTKIIISTNIAETSITIDDVVYVIDSGKMREKRYDPGKSME 963

  Fly   561 SLMVVPISKASANQRAGRAGRTAPGKCFRLYTAWAYKHELEDNTVPEIQRINLGNAVLMLKALGI 625
            ||....:|:|:|.||.|||||.|.|.||.|:|:..|:::|.|..:||||||.|....|.:|.|.:
 Frog   964 SLEDTWVSRANAMQRKGRAGRVASGVCFHLFTSHHYQYQLLDQQLPEIQRIPLEQLCLRIKILEM 1028

  Fly   626 -----NDLIHFDFLDPPPHETLVLALEQLYALGALNHHGELTKLGRRMAEFPVDPMMGKMLLASE 685
                 .||:....::||..|:|..:..:|..||||....:||.||..:|..|||..:||::|...
 Frog  1029 FSECRLDLVFARLIEPPRMESLHASKIRLQDLGALTKEEKLTPLGYHLASLPVDVRIGKLMLFGA 1093

  Fly   686 KYKCSEEMVTIAAMLSVNSAIFYRPKDKIIHADTARKNFNHMHGDHLSLLQVYNQWA-----ETD 745
            .::|.:..:||||.|:..|. |..|.||...|:..::.|...:.|||:|||.|..|:     .:.
 Frog  1094 IFRCLDPALTIAASLAFKSP-FVCPWDKKEEANKKKQEFATANSDHLALLQAYQAWSSVIKESSR 1157

  Fly   746 YSTQWCYENFIQYRSMKRARDVR 768
            .:.|:|.:||:..|.::....::
 Frog  1158 AAYQYCRDNFLSVRVLQEIASLK 1180

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
l(2)37CbNP_609946.1 PTZ00121 <6..267 CDD:173412 53/322 (16%)
HrpA 251..>868 CDD:441249 201/626 (32%)
dhx57NP_001163976.1 UBA_DHX57 185..222 CDD:270502
RWD_DHX57 246..424 CDD:467661 29/148 (20%)
zf-CCCH_4 308..329 CDD:465626 2/21 (10%)
HrpA 557..>1109 CDD:441249 180/551 (33%)
Blue background indicates that the domain is not in the aligned region.

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