DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment l(2)37Cb and dhx37

DIOPT Version :9

Sequence 1:NP_609946.1 Gene:l(2)37Cb / 35192 FlyBaseID:FBgn0086444 Length:894 Species:Drosophila melanogaster
Sequence 2:XP_005172500.1 Gene:dhx37 / 100009635 ZFINID:ZDB-GENE-030131-4505 Length:1153 Species:Danio rerio


Alignment Length:1061 Identity:318/1061 - (29%)
Similarity:480/1061 - (45%) Gaps:212/1061 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 KNRKRTASSSSSGEEPDSEEESRLKD---LQERDEF------ASRLKKRDDDRTRNVVDSTGGRR 59
            |.|:::.|..::..:..:..:..::|   |:..|:.      |::.||:..:|     ..|..:.
Zfish    11 KGRQQSTSVQTAAADRQTNVQVEIQDGAVLKGVDDCNALVLPATKTKKQKVER-----PVTKKKA 70

  Fly    60 AIEEATKRLKLEHEDRDKIVPHLRLQSRRQYLEKRKDDKVAELEADIL---------DDEYLFDE 115
            ..::..|.|:...|.:||      ...|.:.|.|..:.::.|.|..:|         ...|...|
Zfish    71 LTKKQRKNLEKVLEQKDK------KAHRAEVLSKLAEVQLPEAELKLLYTTAKLGTGGKLYHIKE 129

  Fly   116 SVLTKREKEEREYKKQLLNIA--KEHEKARELERIQRYNMPQDLKKGERSEYVEVDEFEKQPNSE 178
            ||...::......|...|:.|  |...:|.|.|......|.:..:..:.||..:..|.||:..||
Zfish   130 SVNEGQDGGSSSVKISSLSGANRKRRREADEEEEENESEMSESSEDDDDSEESDSSEEEKEKISE 194

  Fly   179 QKKWEAEQLASA-RFHFGAKDAKAEEEYELLLDDQIDFIQALTLDGSREKSSSRQPELTEKERKR 242
            :|..|.:|.... :.....|:|..:||.:.....:.|...|:.:      ...|.||        
Zfish   195 EKHTEEQQQQQVLKEETKPKEADMKEEKKAETWTKEDCKPAVFI------PVERLPE-------- 245

  Fly   243 LTLDETRRSLPVYPFKEDLIAAVKEHQVLIIEGETGSGKTTQVPQYLVEAGFTKDKKMIGCTQPR 307
              :.|.|..|||...::.::.|||:|:.:::.|||||||||||||:|.||||.....:||.|:||
Zfish   246 --IQEARLRLPVLAEEQIIMEAVKDHECVVLCGETGSGKTTQVPQFLYEAGFASSGGIIGVTEPR 308

  Fly   308 RVAAMSVAARVAEEMGVKLGNEVGYSIRFEDCTSDRTILKYMTDGTLHREFLSEPDLASYSVMII 372
            ||||:|::.|||.||.:..| .|.|.||:|...::.|.:|.||||.|.:|...:..|..|||:||
Zfish   309 RVAAISMSHRVATEMNLSSG-VVSYQIRYEGNVTENTKIKVMTDGVLLKEIQRDFLLQKYSVIII 372

  Fly   373 DEAHERTLHTDILFGLVKDIARFRPE----LKLLISSATLDAEKFS----AFFDDAPIFRIPGRR 429
            ||||||:::||||.||:..|...|.:    :||:|.||||..|.|:    .|....|:.::..|:
Zfish   373 DEAHERSVYTDILIGLLSRIVPLRNKKGLPMKLIIMSATLRVEDFTENKRLFSSPPPVIKVEARQ 437

  Fly   430 YPVDIFYTK-APEADYIDACCVSVLQIHATQPLGDILVFLTGQDEIET-CQ-------------- 478
            :.|.:.:.| .|..||.......:.:||...|.|.||||||||.|:.: |:              
Zfish   438 FAVTVHFNKRTPMDDYTGETFRKICKIHRMLPPGGILVFLTGQAEVHSVCRRLRKAFPYKPNREH 502

  Fly   479 ----EVLHD-----RVKRL-------------------GSKIRE--------------------- 494
                |...|     |.|:.                   |.:.|:                     
Zfish   503 TDMMETEEDLKKSKRAKKKNVSLPRINLDNYSALPVDEGDEDRQAGIDEDDGEGSDLELELGDHP 567

  Fly   495 -------------LIVIPVYANLPSDMQAKIFEPTPPNARKVILATNIAETSLTIDNIIYVIDPG 546
                         |.|:|:|:.|..:.|||:|.|.|..:|..::|||:|||||||..|.||:|.|
Zfish   568 DTDHEEKADPSIPLYVLPLYSLLAPEQQAKVFRPPPAGSRLCVVATNVAETSLTIPGIKYVVDCG 632

  Fly   547 FAKQNNFNSRTGMESLMVVPISKASANQRAGRAGRTAPGKCFRLYTAWAYKHELEDNTVPEIQRI 611
            ..|:..::..||:.|..|..||:|||||||||||||.||.|:|||:: |...:....:..||.|.
Zfish   633 RVKKRFYDRVTGVSSFKVTWISQASANQRAGRAGRTEPGHCYRLYSS-AVFGDFSLFSEAEITRR 696

  Fly   612 NLGNAVLMLKALGINDLIHFDFLDPPPHETLVLALEQLYALGALN---HHGELTK---------- 663
            .:.:.||.:|.|.|..:::|.|..||..|.|:.|.|.|.:||||.   .||.|::          
Zfish   697 PVEDLVLQMKDLNIEKVVNFPFPTPPSSEALIAAEELLISLGALEKPARHGRLSEMEKARLSCPI 761

  Fly   664 --LGRRMAEFPVDPMMGKMLLASEKYKCSEEMVTIAAMLSVNSAI--FYRPKDKIIHADTARKNF 724
              |||.||.|||.|...|||....:..|.:.::||.:.::|....  :.||      |.:..:|.
Zfish   762 SPLGRAMAAFPVAPRYAKMLALGRQQGCMQYIITIVSAMTVREIFEDYDRP------AGSEEENV 820

  Fly   725 NHMHGDHLSLLQVYNQWAETDYS----------------------TQWCYENFIQYRSMKRARDV 767
            . |.|.....:|:...||....|                      .|:|.||.:::::|...|.:
Zfish   821 K-MSGKKARSVQMRRLWAGQGASLLLGDLMVLLGAVGACEFAGLTPQFCEENGLRFKAMLEIRRL 884

  Fly   768 REQLVGLMQRVEID---------------MVSCLPETVNVRKAATAGYFYHVARLSKG------- 810
            |.||...:..|..|               .|.||      |:...||...|:||..:.       
Zfish   885 RGQLTNAVNAVCADADVYVDNKMAPPTEAQVLCL------RQIVLAGLGDHIARRVQAEELLDPK 943

  Fly   811 --GHYKTIKHNQTVMIHPNSSLFEELPRWVLYHELVFTSKEYMRQVIEIESKWLLEVAPHYYKAK 873
              ..|||...:..|.|||:|:|.:.||.:|:|.|::.|:|.|||.|..::..|:.::.|.|....
Zfish   944 WRNAYKTPLLDDPVFIHPSSALHKTLPEFVVYQEIMETTKMYMRGVCAVQDDWIPKLLPQYCHFS 1008

  Fly   874 ELEDSTNKKMPKVAGRAEMAQ 894
            ..|:|...:...:.||.:..|
Zfish  1009 APEESPAPRFCPLIGRVKCHQ 1029

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
l(2)37CbNP_609946.1 HrpA 222..867 CDD:224557 261/793 (33%)
DEXDc 269..408 CDD:238005 72/142 (51%)
HELICc 491..581 CDD:197757 45/123 (37%)
HA2 651..735 CDD:214852 29/100 (29%)
OB_NTP_bind 770..869 CDD:285018 35/122 (29%)
dhx37XP_005172500.1 HrpA 200..1007 CDD:224557 270/837 (32%)
DEXDc 272..412 CDD:238005 72/140 (51%)
HELICc 583..667 CDD:197757 43/83 (52%)
HA2 730..781 CDD:282288 20/50 (40%)
HA2 761..>813 CDD:214852 18/57 (32%)
OB_NTP_bind <918..1004 CDD:285018 29/91 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1643
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D354219at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.820

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