DRSC/TRiP Functional Genomics Resources

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Protein Alignment l(2)37Cb and dqx1

DIOPT Version :9

Sequence 1:NP_609946.1 Gene:l(2)37Cb / 35192 FlyBaseID:FBgn0086444 Length:894 Species:Drosophila melanogaster
Sequence 2:XP_021332040.1 Gene:dqx1 / 100002601 ZFINID:ZDB-GENE-150224-1 Length:571 Species:Danio rerio


Alignment Length:683 Identity:182/683 - (26%)
Similarity:292/683 - (42%) Gaps:180/683 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   202 EEEYELLLDDQIDFIQALTLDGSREKSSSRQPELTEKERKRLTLDETRRSLPVYPFKEDLIAAVK 266
            ||:.|.|.||..| ::....||.  ..|||...|.|:          |:.|||:..|..|:..::
Zfish    38 EEDGEPLDDDLAD-LEVNPYDGL--PFSSRYYSLLEQ----------RKQLPVWSLKLSLLEHME 89

  Fly   267 EHQVLIIEGETGSGKTTQVPQYLVEAGFTKD--KKMIGCTQPRRVAAMSVAARVAEEMGVKLGNE 329
            :|.::|:..:.|:||:|||||:.||...:.:  :.::..|||...||.|:|.|.|:||.:.||.|
Zfish    90 KHSMIILSSDGGTGKSTQVPQWCVEYAQSHEFSQGVVCVTQPYSAAACSLALRAADEMDLSLGLE 154

  Fly   330 VGYSIRFED-CTSDRTILKYMTDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIA 393
            |||.:..|| ||.| |||:::||..|.:|.:|:|.|..|.|::||||.|||:.||:|.||::|:.
Zfish   155 VGYRVPHEDGCTPD-TILRFVTDALLLQEMMSDPLLRQYGVLVIDEAQERTVATDVLLGLLRDVC 218

  Fly   394 RFRPELKLLISSATLDAEKFSAFF-DDAPIFRIP-GRRYPVDIFYTKAPEA--DYIDACCVSVLQ 454
            |.|.:|::|:.:|...|..||:|. :..|..::| ..:...::.| :.|.|  |.:.|...::|.
Zfish   219 RQRADLRVLVLTAPAAATSFSSFLGETVPHLQLPCAPQTHTEVLY-REPAAGRDLLTAAVHTILD 282

  Fly   455 IHATQPLGDILVFLTGQDEIETCQEVLHDRVKRLGSKIRELIVIPVYANLPSDMQAKIF------ 513
            :|.....||:||||.|..||..|...|......|.:::..|.|:.|:|. .....|:::      
Zfish   283 LHRRGEPGDMLVFLPGPQEISECASALEKECVSLSAQLSCLRVVCVHAG-AGGSSAQLYDTEAPD 346

  Fly   514 ----EPTPPNARKVILATNIAETSLTIDNIIYVIDPGFAKQNNFNSRTGMESLMVVPISKASANQ 574
                ||.....|:|:|....||.|.:|:|:.||||.|                            
Zfish   347 GGELEPAEDPRRRVVLTDACAEASFSINNVRYVIDCG---------------------------- 383

  Fly   575 RAGRAGRTAPGKCFRLYTAWAYKHELEDNTVPEIQRINLGNAVLMLKALGINDLIHFDFLDPPPH 639
                                                       :.:|.:.:...:....:..|| 
Zfish   384 -------------------------------------------VQIKTVCVCVCVCVCAVSAPP- 404

  Fly   640 ETLVLALEQLYALGALNHHGELTKLGRRMAEFPVDPMMGKMLLASEKYKCSEEMVTIAAMLSVNS 704
                                                             |   .||         
Zfish   405 -------------------------------------------------C---FVT--------- 408

  Fly   705 AIFYRPKDKIIHADTARKNFNHMHGDHLSLLQVYNQWAETDYSTQWCYENFIQYRSMKRARDVRE 769
                .|.||:..|.|.|:...|..|||::|:.:||.:.:.:....||..||:...:::.|..:|.
Zfish   409 ----PPADKVEAAATHRRTMLHPDGDHMTLINIYNAYLQHNEDEAWCRTNFLSSSALRLAVVIRA 469

  Fly   770 QLVGLMQRVEIDM----VSCLPETVNVRKAATAGYFYHVAR-LSKGGHYKTIKHNQTVMIHPNSS 829
            :|:.:|||:|:.:    ..|...:.|:::|..:|:|..||. :...|:|..:.|.....:||.||
Zfish   470 ELLEVMQRIELPVSPPAFGCQDNSTNIKRALISGFFLKVAHDVDGSGNYLLLTHRHVSQLHPFSS 534

  Fly   830 LFEELPR-----WVLYHELVFTSKEYMRQVIEI 857
            .....|:     |||||:...:....:..|.||
Zfish   535 YRCRRPQLSPPSWVLYHDFTVSHDNCICIVSEI 567

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
l(2)37CbNP_609946.1 HrpA 222..867 CDD:224557 175/663 (26%)
DEXDc 269..408 CDD:238005 63/141 (45%)
HELICc 491..581 CDD:197757 20/99 (20%)
HA2 651..735 CDD:214852 13/83 (16%)
OB_NTP_bind 770..869 CDD:285018 28/98 (29%)
dqx1XP_021332040.1 HA2 47..>385 CDD:331981 124/424 (29%)
OB_NTP_bind 469..570 CDD:311586 28/99 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D354219at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.920

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