DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ddc and GAD1

DIOPT Version :9

Sequence 1:NP_724163.1 Gene:Ddc / 35190 FlyBaseID:FBgn0000422 Length:510 Species:Drosophila melanogaster
Sequence 2:NP_013976.1 Gene:GAD1 / 855291 SGDID:S000004862 Length:585 Species:Saccharomyces cerevisiae


Alignment Length:393 Identity:83/393 - (21%)
Similarity:129/393 - (32%) Gaps:113/393 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   119 NSYPAIVADMLSGAIACIGFTWIASPACTELEVVMMDWLGKMLELPAEFLACSGGKGGGVIQGTA 183
            :.||.:: ::....|:.:...|.|:|                   ..|.:.|:          |.
Yeast   118 DEYPQLI-ELTQRCISMLAQLWHANP-------------------DEEPIGCA----------TT 152

  Fly   184 SESTLVALLGAKAKKLKEVKELHPEWDEHTI--LGKLVG----YCSDQAHSSVERAGLLGGVKLR 242
            ..|..:.|.|...||         .| ||.:  .||...    ..|.....::|:......|:.|
Yeast   153 GSSEAIMLGGLAMKK---------RW-EHRMKNAGKDASKPNIIMSSACQVALEKFTRYFEVECR 207

  Fly   243 SVQSENHRMRGAALEKAIEQDVAEGLIPFYAVVTLGTTNSCAFDYLDECGPVGN----KHNLW-- 301
            .| ..:||.......:::...|.|..|..:  |.||||.:...:.:::...|.:    ||..|  
Yeast   208 LV-PVSHRSHHMLDPESLWDYVDENTIGCF--VILGTTYTGHLENVEKVADVLSQIEAKHPDWSN 269

  Fly   302 ----IHVDAAYAGSAFICP---EYRHLMK-GIESADSFNFNPHKWMLVNFDCSAMWLKDP--SWV 356
                ||.|.|..|  ||.|   |..|:.. |:|   .:.||..:.:.:|.......|..|  .||
Yeast   270 TDIPIHADGASGG--FIIPFGFEKEHMKAYGME---RWGFNHPRVVSMNTSGHKFGLTTPGLGWV 329

  Fly   357 V---NAFNVDPLYLKHDMQGSAPDYRHWQIPLGRRFRALKLWFVLRLYGVENLQAHIRRHCNFAK 418
            :   .:...|.|..|....|...:      ..|..|.......|.:.:...:|     .|..:..
Yeast   330 LWRDESLLADELRFKLKYLGGVEE------TFGLNFSRPGFQVVHQYFNFVSL-----GHSGYRT 383

  Fly   419 QF-GDLCVADS-RFELAAEINMGLV--CFRLKGSNERNEALLKRINGRGHIH------LVPAKIK 473
            || ..|.||.: .|||   :|...:  ||.:..|                ||      ..|..:|
Yeast   384 QFQNSLFVARAFSFEL---LNSSKLPGCFEIVSS----------------IHESIENDSAPKSVK 429

  Fly   474 DVY 476
            |.:
Yeast   430 DYW 432

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DdcNP_724163.1 Pyridoxal_deC 70..446 CDD:278699 77/355 (22%)
GAD1NP_013976.1 Glu-decarb-GAD 41..522 CDD:130848 83/393 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0076
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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