DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ddc and Gadl1

DIOPT Version :9

Sequence 1:NP_724163.1 Gene:Ddc / 35190 FlyBaseID:FBgn0000422 Length:510 Species:Drosophila melanogaster
Sequence 2:NP_001382689.1 Gene:Gadl1 / 73748 MGIID:1920998 Length:522 Species:Mus musculus


Alignment Length:533 Identity:140/533 - (26%)
Similarity:223/533 - (41%) Gaps:70/533 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 NGKANISPDKLDPKVSID---MEAPEFKDFAKTMVDFIAEYLENIRERRVLPEV----------K 69
            :|:..::|.|..| :.:|   :..|:..  .|....|:.|....|.|..||...          .
Mouse    16 SGQKEMTPGKKIP-IFVDGVVLNGPQTD--VKAGEKFVEEACRLIMEEVVLKATDVNEKVCEWQP 77

  Fly    70 PGYLKPLIPDAAPEKPEKWQDVMQDIERVIMPGVTHWHSPKFHAYFPTANSYPAIVADMLSGAIA 134
            |..|:.|:.....:..|....:::..:.||...|...| |:|.........|.::.|.:::.|:.
Mouse    78 PEQLRQLLDLEMRDTGESQDKLLKLCQDVIHFSVKTNH-PRFFNQLYAGLDYYSLAARIITEALN 141

  Fly   135 CIGFTWIASPACTELEVVMMDWLGKMLELPAEFLACSGGK-GGGVIQGTASESTLVALLGAKAKK 198
            ...:|:..||....:|..:   |.||:|       |.|.| |.|:.....|.|.:.|:..|:.:.
Mouse   142 PSIYTYEVSPVFLLVEEAV---LKKMIE-------CVGWKEGDGIFNPGGSVSNMCAMNLARYRH 196

  Fly   199 LKEVKELHPEWDEHTILGKLVGYCSDQAHSSVERAGLLGGVKLRSVQSENHRMRGAA----LEKA 259
            ..::||     ...:.|.:|:.:.|.:.|.|:::|....|:..::|.......||..    |||.
Mouse   197 CPDIKE-----KGLSGLPRLILFTSAECHYSMKKAASFLGIGTQNVYFVETDGRGKMIPEDLEKQ 256

  Fly   260 IEQDVAEGLIPFYAVVTLGTTNSCAFDYLDECGPVGNKHNLWIHVDAAYAGSAFICPEYRHLMKG 324
            |.|...||.:||....|.|||...|||.|||...|..:|.||:||||::.|||.:..::|.|:.|
Mouse   257 IWQARQEGAVPFLVCATSGTTVLGAFDPLDEIAEVCERHGLWLHVDASWGGSALVSRKHRRLLHG 321

  Fly   325 IESADSFNFNPHKWMLVNFDCSAMWLKDPSWVVN---------AFNVDPLYLKHDMQGSAPDYRH 380
            |..|||..:||||.::....|||:.:||.|.::.         .|..|..|   |:.....|.  
Mouse   322 IHRADSVAWNPHKMLMAGIQCSALLVKDKSDLLKKCYSAKATYLFQQDKFY---DVSYDTGDK-- 381

  Fly   381 WQIPLGRRFRALKLWFVLRLYGVENLQAHIRRHCNFAKQFGDLCVADSRFELAAEINMGLVCF-- 443
             .|...||..|.|.|...:..|...|:..:.|....::...|.......|:|..|.....|||  
Mouse   382 -SIQCSRRPDAFKFWMTWKALGTSGLEERVNRAFALSRYLVDEIKKREGFKLLMEPEYTNVCFWY 445

  Fly   444 ---RLKGSNERNE----------ALLKRINGRGHIHL--VPAKIKDVYFLRMAICSRFTQSEDME 493
               .|:...|..|          |:.:::..:|.:.|  .|.:.| |.|.|..:.|.....|||:
Mouse   446 IPPSLREMEEGPEFWRKLSLVAPAIKEKMMKKGSLMLGYQPHRGK-VNFFRQVVISPQVSREDMD 509

  Fly   494 YSWKEVSAAADEM 506
            :...|:.:...:|
Mouse   510 FLLDEIDSLGRDM 522

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DdcNP_724163.1 Pyridoxal_deC 70..446 CDD:278699 110/394 (28%)
Gadl1NP_001382689.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0076
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.