DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ddc and Tdc1

DIOPT Version :9

Sequence 1:NP_724163.1 Gene:Ddc / 35190 FlyBaseID:FBgn0000422 Length:510 Species:Drosophila melanogaster
Sequence 2:NP_610226.2 Gene:Tdc1 / 35573 FlyBaseID:FBgn0259977 Length:587 Species:Drosophila melanogaster


Alignment Length:477 Identity:220/477 - (46%)
Similarity:312/477 - (65%) Gaps:11/477 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    36 MEAPEFKDFAKTMVDFIAEYLENIRERRVLPEVKPGYLKPLIPDAAPEKPEKWQDVMQDIERVIM 100
            |:..||:.:.|.::|:|.:|..||.||.|.|.:.|||||.|:|..||:.||.::||::|.|:.||
  Fly     1 MDVEEFRKYGKEVIDYICQYGTNIEERDVAPTLDPGYLKKLLPADAPQSPEPFKDVLEDFEQKIM 65

  Fly   101 PGVTHWHSPKFHAYFPTANSYPAIVADMLSGAIACIGFTWIASPACTELEVVMMDWLGKMLELPA 165
            |||.||:.|||.||||:.||:|:::.||||.||..|||:|.:.||..|||.::|:|..|.|.||.
  Fly    66 PGVVHWNHPKFFAYFPSGNSFPSVLGDMLSSAIGSIGFSWASCPAAAELETIVMNWYAKALGLPK 130

  Fly   166 EFLA-CSGGKGGGVIQGTASESTLVALLGAKAKKLKEVK---ELHPEWDEHTILGKLVGYCSDQA 226
            .|:: ..|..|||.:||:|||..||:|:.|:|:.:.|:|   .:|    :...|..|:.|.|.:|
  Fly   131 AFVSDAPGSTGGGALQGSASECVLVSLITARARAISELKGQTSVH----DSVFLPSLIAYASREA 191

  Fly   227 HSSVERAGLLGGVKLRSVQSENH-RMRGAALEKAIEQDVAEGLIPFYAVVTLGTTNSCAFDYLDE 290
            |||||:|..:..||||.:.::.| |||...|.:||:.||..||.||:.|.|:|||..||||.:.|
  Fly   192 HSSVEKATKMALVKLRIIDADEHGRMRVDLLRQAIQNDVNAGLTPFFVVATVGTTGGCAFDDITE 256

  Fly   291 CGPVGNK-HNLWIHVDAAYAGSAFICPEYRHLMKGIESADSFNFNPHKWMLVNFDCSAMWLKDPS 354
            .|.|..: .::|:|||.||||::||.||.|....|:|.|||||.||:|.:|.|||.||:|::|..
  Fly   257 IGKVCRQVSSIWLHVDGAYAGNSFILPEMRVFSAGLEYADSFNTNPNKLLLTNFDASALWVRDVM 321

  Fly   355 WVVNAFNVDPLYLKHDMQGSAPDYRHWQIPLGRRFRALKLWFVLRLYGVENLQAHIRRHCNFAKQ 419
            .:.:|.||:||||:|: ..:..||||:.|||.|||||||||||.|.||:..||.:||.|...||:
  Fly   322 NLKSALNVNPLYLRHE-HLTGVDYRHYGIPLSRRFRALKLWFVFRTYGIRGLQEYIRNHMALAKK 385

  Fly   420 FGDLCVADSRFELAAEINMGLVCFRLKGSNERNEALLKRINGRGHIHLVPAKIKDVYFLRMAICS 484
            |..|...|.|||:..::::||||||::..:|.|..||.:||..|.:|:.|||....|.:|..:..
  Fly   386 FEMLVRKDERFEVRNDVHLGLVCFRMRTGDEPNHMLLAQINHSGKMHMTPAKFNGRYVIRFCVTY 450

  Fly   485 RFTQSEDMEYSWKEVSAAADEM 506
            .....:|:..:|.::...|:|:
  Fly   451 EHATEKDILEAWTQIKCFAEEI 472

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DdcNP_724163.1 Pyridoxal_deC 70..446 CDD:278699 190/381 (50%)
Tdc1NP_610226.2 Pyridoxal_deC 35..412 CDD:278699 190/381 (50%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 368 1.000 Domainoid score I180
eggNOG 1 0.900 - - E1_COG0076
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 417 1.000 Inparanoid score I444
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D223497at33208
OrthoFinder 1 1.000 - - FOG0000865
OrthoInspector 1 1.000 - - mtm1068
orthoMCL 1 0.900 - - OOG6_100572
Panther 1 1.100 - - P PTHR11999
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X696
109.870

Return to query results.
Submit another query.