DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ddc and GAD1

DIOPT Version :9

Sequence 1:NP_724163.1 Gene:Ddc / 35190 FlyBaseID:FBgn0000422 Length:510 Species:Drosophila melanogaster
Sequence 2:NP_000808.2 Gene:GAD1 / 2571 HGNCID:4092 Length:594 Species:Homo sapiens


Alignment Length:514 Identity:126/514 - (24%)
Similarity:198/514 - (38%) Gaps:86/514 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    44 FAKTMVDFIAEYLENIRERRV----------LPEVKPGYLKPLIPDAAPEKPEKWQDVMQDIERV 98
            |...:||.:..|:....:|..          |.|...|:...|     .:.||..:.::.|....
Human   116 FLLEVVDILLNYVRKTFDRSTKVLDFHHPHQLLEGMEGFNLEL-----SDHPESLEQILVDCRDT 175

  Fly    99 IMPGVTHWHSPKFHAYFPTANSYPAIVADMLSGAIACIGFTWIASPACTELEVVMMDWLGKMLEL 163
            :..||...| |:|.....|......:..:.|:.......||:..:|....:|.:.   |.||.|:
Human   176 LKYGVRTGH-PRFFNQLSTGLDIIGLAGEWLTSTANTNMFTYEIAPVFVLMEQIT---LKKMREI 236

  Fly   164 PAEFLACSGGKGGGVIQGTASESTLVALLGAKAKKLKEVKELHPEWDEHTILGKLVGYCSDQAHS 228
                :..|...|.|:.....:.|.:.:::.|:.|...|||.     .....:.|||.:.|:|:|.
Human   237 ----VGWSSKDGDGIFSPGGAISNMYSIMAARYKYFPEVKT-----KGMAAVPKLVLFTSEQSHY 292

  Fly   229 SVERAGLLGGVKLRSVQSENHRMRGAALEKAIEQDVAE----GLIPFYAVVTLGTTNSCAFDYLD 289
            |:::||...|....:|.......||..:....|..:.|    |.:|||...|.|||...|||.:.
Human   293 SIKKAGAALGFGTDNVILIKCNERGKIIPADFEAKILEAKQKGYVPFYVNATAGTTVYGAFDPIQ 357

  Fly   290 ECGPVGNKHNLWIHVDAAYAGSAFICPEYRHLMKGIESADSFNFNPHKWMLVNFDCSAMWLKDPS 354
            |...:..|:|||:|||||:.|...:..::||.:.|||.|:|..:||||.|.|...|||:.:|:..
Human   358 EIADICEKYNLWLHVDAAWGGGLLMSRKHRHKLNGIERANSVTWNPHKMMGVLLQCSAILVKEKG 422

  Fly   355 WVVNA--------FNVDPLY-LKHDMQGSAPDYRHWQIPLGRRFRALKLWFVLRLYGVENLQAHI 410
            .:...        |..|..| :.:|....|       |..||.....|.|.:.:..|....:..|
Human   423 ILQGCNQMCAGYLFQPDKQYDVSYDTGDKA-------IQCGRHVDIFKFWLMWKAKGTVGFENQI 480

  Fly   411 RRHCNFAKQFGDLCVADSRFELA--AEINMGLVCF-----RLKG---SNERNEALLKRINGRGHI 465
            .:....|:...........||:.  .|.....|||     .|:|   |.:|.|.|          
Human   481 NKCLELAEYLYAKIKNREEFEMVFNGEPEHTNVCFWYIPQSLRGVPDSPQRREKL---------- 535

  Fly   466 HLVPAKIKDVY------------------FLRMAICSRFTQSEDMEYSWKEVSAAADEM 506
            |.|..|||.:.                  |.||.|.:......|:::..:|:.....::
Human   536 HKVAPKIKALMMESGTTMVGYQPQGDKANFFRMVISNPAATQSDIDFLIEEIERLGQDL 594

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DdcNP_724163.1 Pyridoxal_deC 70..446 CDD:278699 102/395 (26%)
GAD1NP_000808.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..23
Pyridoxal_deC 144..518 CDD:365998 104/398 (26%)
Substrate binding 190..192 0/1 (0%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0076
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

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