DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ddc and Csad

DIOPT Version :9

Sequence 1:NP_724163.1 Gene:Ddc / 35190 FlyBaseID:FBgn0000422 Length:510 Species:Drosophila melanogaster
Sequence 2:NP_001346055.1 Gene:Csad / 246277 MGIID:2180098 Length:493 Species:Mus musculus


Alignment Length:475 Identity:118/475 - (24%)
Similarity:191/475 - (40%) Gaps:66/475 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    69 KPGYLKPLIPDAAPEKPEKWQDVMQDIERVIMPGVTHWHSPKFHAYFPTANSYPAIVADMLSGAI 133
            :|..||.|:......:.|..:.:::....||...|...|...|:..|...:.: |:...:::.::
Mouse    48 EPEELKQLLDLELQSQGESREQILERCRTVIHYSVKTGHPRFFNQLFSGLDPH-ALAGRIITESL 111

  Fly   134 ACIGFTWIASPACTELEVVMMDWLGKMLELPAEFLACSGGKGGGVIQGTASESTLVALLGAKAKK 198
            ....:|:..:|....:|..::..|..::         ....|.||.....|.|.:.|:..|:.::
Mouse   112 NTSQYTYEIAPVFVLMEEEVLKKLRALV---------GWNSGDGVFCPGGSISNMYAMNLARFQR 167

  Fly   199 LKEVKE-----LHPEWDEHTILGKLVGYCSDQAHSSVERAGLLGGVKLRSVQ----SENHRMRGA 254
            ..:.|:     |.|          |..:.|.:.|.|:.:.....|:...||:    .|..||...
Mouse   168 YPDCKQRGLRALPP----------LALFTSKECHYSITKGAAFLGLGTDSVRVVKADERGRMIPE 222

  Fly   255 ALEKAIEQDVAEGLIPFYAVVTLGTTNSCAFDYLDECGPVGNKHNLWIHVDAAYAGSAFICPEYR 319
            .||:.|....|||.:||....|.|||...|||.||....|..:|.||.|||||:.||..:...:|
Mouse   223 DLERQIILAEAEGSVPFLVSATSGTTVLGAFDPLDAIADVCQRHGLWFHVDAAWGGSVLLSRTHR 287

  Fly   320 HLMKGIESADSFNFNPHKWMLVNFDCSAMWLKDPSWVVN---------AFNVDPLYLKHDMQGSA 375
            ||:.||:.|||..:||||.:.....|||:.|:|.|.::.         .|..|..|   |:   |
Mouse   288 HLLDGIQRADSVAWNPHKLLAAGLQCSALLLRDTSNLLKRCHGSQASYLFQQDKFY---DV---A 346

  Fly   376 PDYRHWQIPLGRRFRALKLWFVLRLYGVENLQAHIRRHCNFAKQFGDLCVADSRFELAAEINMGL 440
            .|.....:..|||...||||.:.:..|.:.|:..|.:.....:...:.......|||..|.....
Mouse   347 LDTGDKVVQCGRRVDCLKLWLMWKAQGGQGLERRIDQAFALTRYLVEEIKKREGFELVMEPEFVN 411

  Fly   441 VCF-----RLKGSNER--------------NEALLKRINGRGHIHLVPAKIKDVYFLRMAICSRF 486
            |||     .|:|..|.              .|.::|:  |...|...|...: ..|.||.:.:..
Mouse   412 VCFWFVPPSLRGKKESPDYSQRLSQVAPVLKERMVKK--GTMMIGYQPHGTR-ANFFRMVVANPI 473

  Fly   487 TQSEDMEYSWKEVSAAADEM 506
            ....|:::...|:.....::
Mouse   474 LAQADIDFLLGELELLGQDL 493

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DdcNP_724163.1 Pyridoxal_deC 70..446 CDD:278699 105/398 (26%)
CsadNP_001346055.1 DOPA_deC_like 89..481 CDD:99743 108/420 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0076
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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