DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ddc and hdl-2

DIOPT Version :9

Sequence 1:NP_724163.1 Gene:Ddc / 35190 FlyBaseID:FBgn0000422 Length:510 Species:Drosophila melanogaster
Sequence 2:NP_501539.3 Gene:hdl-2 / 182464 WormBaseID:WBGene00006409 Length:611 Species:Caenorhabditis elegans


Alignment Length:459 Identity:107/459 - (23%)
Similarity:189/459 - (41%) Gaps:91/459 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    43 DFAKTM---VDFIAEYLENIRERRVLPE---------VKPGYLKPLIPDAAPEKPEKWQDVMQDI 95
            :|.|.|   |.||.:|.:...::.|:||         ||           .|||.|:..::::|:
 Worm   118 EFIKCMSLVVQFINDYFDESHKQPVIPENDVNSSRIHVK-----------VPEKAEELTEILKDL 171

  Fly    96 ERVIMPGVTHWHSPKFHAYFPTANSYPAIVADMLSGAIACIGFTWIASPACTELEVVMMDWLGKM 160
            :.:::|.:.|.|.|::||.| ...|...:||..:|   |.:|....:||....:|.::..||...
 Worm   172 KEIVIPNICHTHHPRYHAKF-AGKSLADLVASTIS---AALGHDVNSSPIIESIERIICKWLSTS 232

  Fly   161 LELPAEFLACSGGK---GGGVIQGTASESTLVALLGA--KAKKLKEVKELHPEWDEHTILGKLVG 220
            :.:|.  :..|.|:   ..|.:..|..:..:..:..|  |.:|....||.....|       .:.
 Worm   233 MAIPQ--IKSSLGELRDPIGTVFYTPCDVFISVIRHAIEKFEKTDSGKERSKNAD-------YIV 288

  Fly   221 YCSDQAHSSVERAGLLGGVKLRSV---QSENHRMRGAALEKAIEQDVAEGLIPFYAVVTLGTTNS 282
            ||||.:...::...:...||||.|   :.....|..|.|.|.:|:|:|.|..|...:...|:.|.
 Worm   289 YCSDDSQVPLKEPCISCRVKLRKVITDEKNGSGMTSANLLKQMEKDIARGFTPLVIIANYGSANI 353

  Fly   283 CAFDYLDECGPVGNKHNLWIHVDAAYAGSAFICPEYRHLMKGIESADSFNFNPHKWMLVNFDCSA 347
            .|.|.:.:...|.....:|:|:||:|||..::....|:.:..:.|      ..|.   |:..||:
 Worm   354 AANDEIWDLVTVSRSKKIWLHLDASYAGCEWLDSNSRNNVHALIS------EVHS---VHITCSS 409

  Fly   348 MWLKDP-------SWVVNAFNVDP---LYLKHDMQGSAPDYRHWQIPLGRRFRALKLWFVLRLYG 402
            ::   |       .|......:|.   ||.:|                     .::||.::||:|
 Worm   410 LF---PYSGRISVVWSCEKLELDGAKILYGEH---------------------PIRLWILIRLHG 450

  Fly   403 VENLQAHIRRHCNFAKQFGDLCVADSR-FELAAEINMGLVCFRLKGS--NERNEALLKRINGRGH 464
            :.:::..::|.......|.:.....|: ||:......|:..|:.|..  .:|.|. ..:|....|
 Worm   451 IRSIREAVKRKIILGNAFSERMSHHSQLFEMHHTNEHGVTVFQYKNKKIKDRTED-TNKITSMFH 514

  Fly   465 IHLV 468
            .:||
 Worm   515 NYLV 518

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DdcNP_724163.1 Pyridoxal_deC 70..446 CDD:278699 88/394 (22%)
hdl-2NP_501539.3 AAT_I 125..527 CDD:302748 104/452 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0076
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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