DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ddc and tdc-1

DIOPT Version :9

Sequence 1:NP_724163.1 Gene:Ddc / 35190 FlyBaseID:FBgn0000422 Length:510 Species:Drosophila melanogaster
Sequence 2:NP_495743.1 Gene:tdc-1 / 174327 WormBaseID:WBGene00006562 Length:705 Species:Caenorhabditis elegans


Alignment Length:506 Identity:256/506 - (50%)
Similarity:357/506 - (70%) Gaps:11/506 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 SNTIPTKQTDGNGKANISPDKLDPKVSID----MEAPEFKDFAKTMVDFIAEYLENIRERRVLPE 67
            |.|||:     ....:::|...||:.:.:    |...||:.:.|..||:|.:|||||::|||:|.
 Worm    49 STTIPS-----TPNMDVTPTVEDPRQNDNNASGMTRDEFRQYGKETVDYIVDYLENIQKRRVVPA 108

  Fly    68 VKPGYLKPLIPDAAPEKPEKWQDVMQDIERVIMPGVTHWHSPKFHAYFPTANSYPAIVADMLSGA 132
            ::|||||.|||..||..||.::.||:|.|::||||:|||..|:||||||..||:|:|:|||||.|
 Worm   109 IEPGYLKDLIPSEAPNTPESFESVMEDFEKLIMPGITHWQHPRFHAYFPAGNSFPSIIADMLSDA 173

  Fly   133 IACIGFTWIASPACTELEVVMMDWLGKMLELPAEFLACS-GGKGGGVIQGTASESTLVALLGAKA 196
            |.|:||:|.|.||.||||::|:||.|||:.||||||..: .||||||||.:|||...|.||.|:.
 Worm   174 IGCVGFSWAACPAMTELELIMLDWFGKMIGLPAEFLPLTENGKGGGVIQSSASECNFVTLLAARF 238

  Fly   197 KKLKEVKELHPEWDEHTILGKLVGYCSDQAHSSVERAGLLGGVKLRSVQSEN-HRMRGAALEKAI 260
            :.:||:::..|..:|..:|.||:.|||.:||||||:|.::|.||||.::::: .|:||..|..||
 Worm   239 EVMKELRQRFPFVEEGLLLSKLIAYCSKEAHSSVEKACMIGMVKLRILETDSKFRLRGDTLRNAI 303

  Fly   261 EQDVAEGLIPFYAVVTLGTTNSCAFDYLDECGPVGNKHNLWIHVDAAYAGSAFICPEYRHLMKGI 325
            ::|...|||||:...|||||:.|:||.|.|.||:..::.||:||||||:||||||||:|.||.||
 Worm   304 QEDRNLGLIPFFVSTTLGTTSCCSFDVLSEIGPICKENELWLHVDAAYSGSAFICPEFRPLMNGI 368

  Fly   326 ESADSFNFNPHKWMLVNFDCSAMWLKDPSWVVNAFNVDPLYLKHDMQGSAPDYRHWQIPLGRRFR 390
            |.|.|||.||:||:|:|||||.||::|...:..|..||||||:|.....:.|||||.|||.||||
 Worm   369 EYAMSFNTNPNKWLLINFDCSTMWVRDRFKLTQALVVDPLYLQHSWMDKSIDYRHWGIPLSRRFR 433

  Fly   391 ALKLWFVLRLYGVENLQAHIRRHCNFAKQFGDLCVADSRFELAAEINMGLVCFRLKGSNERNEAL 455
            :||||||:|:||::.||.:||.|...||:...|..||::||:..|:.|||||||:||.:|.|:.|
 Worm   434 SLKLWFVIRMYGIDGLQKYIREHVRLAKKMETLLRADAKFEIVNEVIMGLVCFRMKGDDELNQTL 498

  Fly   456 LKRINGRGHIHLVPAKIKDVYFLRMAICSRFTQSEDMEYSWKEVSAAADEM 506
            |.|:|..|.||:|||.:.|.:.:|..:|:.....:|:|.:::.::.|...:
 Worm   499 LTRLNASGRIHMVPASLGDRFVIRFCVCAENATDKDIEVAYEIIAQATQHV 549

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DdcNP_724163.1 Pyridoxal_deC 70..446 CDD:278699 213/377 (56%)
tdc-1NP_495743.1 Pyridoxal_deC 111..489 CDD:278699 213/377 (56%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 42 1.000 Domainoid score I8494
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG57772
OrthoDB 1 1.010 - - D223497at33208
OrthoFinder 1 1.000 - - FOG0000865
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100572
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3838
SonicParanoid 1 1.000 - - X696
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
98.860

Return to query results.
Submit another query.