DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ddc and Ddc

DIOPT Version :9

Sequence 1:NP_724163.1 Gene:Ddc / 35190 FlyBaseID:FBgn0000422 Length:510 Species:Drosophila melanogaster
Sequence 2:NP_001177377.1 Gene:Ddc / 13195 MGIID:94876 Length:480 Species:Mus musculus


Alignment Length:474 Identity:286/474 - (60%)
Similarity:372/474 - (78%) Gaps:3/474 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    36 MEAPEFKDFAKTMVDFIAEYLENIRERRVLPEVKPGYLKPLIPDAAPEKPEKWQDVMQDIERVIM 100
            |::.||:...|.|||:||:||:.|..|.|.|:|:||||:||||..||::||.::|:::|||::||
Mouse     1 MDSREFRRRGKEMVDYIADYLDGIEGRPVYPDVEPGYLRPLIPATAPQEPETYEDIIKDIEKIIM 65

  Fly   101 PGVTHWHSPKFHAYFPTANSYPAIVADMLSGAIACIGFTWIASPACTELEVVMMDWLGKMLELPA 165
            |||||||||.|.||||||:||||::||||.|||.||||:|.|||||||||.|||||||||||||.
Mouse    66 PGVTHWHSPYFFAYFPTASSYPAMLADMLCGAIGCIGFSWAASPACTELETVMMDWLGKMLELPE 130

  Fly   166 EFLACSGGKGGGVIQGTASESTLVALLGAKAKKLKEVKELHPEWDEHTILGKLVGYCSDQAHSSV 230
            .|||...|:|||||||:|||:||||||.|:.|.:::::...||:.:..|:.|||.|.||||||||
Mouse   131 AFLAGRAGEGGGVIQGSASEATLVALLAARTKVIRQLQAASPEFTQAAIMEKLVAYTSDQAHSSV 195

  Fly   231 ERAGLLGGVKLRSVQSE-NHRMRGAALEKAIEQDVAEGLIPFYAVVTLGTTNSCAFDYLDECGPV 294
            |||||:||:||::|.|: |..||.:||.:|:|:|.|.|||||:.|.|||||:.|:||.|.|.||:
Mouse   196 ERAGLIGGIKLKAVPSDGNFSMRASALREALERDKAAGLIPFFVVATLGTTSCCSFDNLLEVGPI 260

  Fly   295 GNKHNLWIHVDAAYAGSAFICPEYRHLMKGIESADSFNFNPHKWMLVNFDCSAMWLKDPSWVVNA 359
            .|:..:|:|:|||||||||||||:|:|:.|:|.|||||||||||:||||||||||:|..:.:..|
Mouse   261 CNQEGVWLHIDAAYAGSAFICPEFRYLLNGVEFADSFNFNPHKWLLVNFDCSAMWVKRRTDLTGA 325

  Fly   360 FNVDPLYLKHDMQ--GSAPDYRHWQIPLGRRFRALKLWFVLRLYGVENLQAHIRRHCNFAKQFGD 422
            ||:||:||||..|  |...||||||||||||||:||:|||.|:|||:.|||:||:|...:.:|..
Mouse   326 FNMDPVYLKHSHQDSGFITDYRHWQIPLGRRFRSLKMWFVFRMYGVKGLQAYIRKHVELSHEFES 390

  Fly   423 LCVADSRFELAAEINMGLVCFRLKGSNERNEALLKRINGRGHIHLVPAKIKDVYFLRMAICSRFT 487
            |...|.|||:..|:.:||||||||||||.||.||:|||....|||||.:::|.:.||.|:|:|..
Mouse   391 LVRQDPRFEICTEVILGLVCFRLKGSNELNETLLQRINSAKKIHLVPCRLRDKFVLRFAVCARTV 455

  Fly   488 QSEDMEYSWKEVSAAADEM 506
            :|..::.:|:.:|..|..:
Mouse   456 ESAHVQLAWEHISDLASSV 474

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DdcNP_724163.1 Pyridoxal_deC 70..446 CDD:278699 242/378 (64%)
DdcNP_001177377.1 Pyridoxal_deC 35..414 CDD:395219 245/381 (64%)
2 X approximate tandem repeats 58..178 83/119 (70%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167849630
Domainoid 1 1.000 524 1.000 Domainoid score I299
eggNOG 1 0.900 - - E1_COG0076
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H618
Inparanoid 1 1.050 613 1.000 Inparanoid score I906
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG57772
OrthoDB 1 1.010 - - D223497at33208
OrthoFinder 1 1.000 - - FOG0000865
OrthoInspector 1 1.000 - - oto93885
orthoMCL 1 0.900 - - OOG6_100572
Panther 1 1.100 - - LDO PTHR11999
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3838
SonicParanoid 1 1.000 - - X696
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1514.840

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