DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10561 and LDL1

DIOPT Version :10

Sequence 1:NP_476608.1 Gene:CG10561 / 35189 FlyBaseID:FBgn0002036 Length:504 Species:Drosophila melanogaster
Sequence 2:NP_176471.1 Gene:LDL1 / 842582 AraportID:AT1G62830 Length:844 Species:Arabidopsis thaliana


Alignment Length:524 Identity:129/524 - (24%)
Similarity:195/524 - (37%) Gaps:157/524 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 IVVVGAGLAGLSAAQHLLSHGFRRTVILEATDRYGGRINTQRF--GDTYCELGAKWVKIDGSQDS 103
            :||||||||||.||:.|||.|| |.::||..||.|||:.|::.  ||          .::...|.
plant   268 VVVVGAGLAGLVAARQLLSMGF-RVLVLEGRDRPGGRVKTRKMKGGD----------GVEAMADV 321

  Fly   104 MYELLRNTEGLGKQIKQPDRATYLQDGSRINPAMVELIDTLFRQLCRGFKVSERVKTGGDLHSLD 168
            ...:|....|                    ||     :..|.|||            |..||.:.
plant   322 GGSVLTGING--------------------NP-----LGVLARQL------------GLPLHKVR 349

  Fly   169 NVMNYFRTES-------DRIIGVSFQHPKDQLAAREIFQSLFKEFGSI---LGCCLE-------- 215
            ::...:....       |..|..||....|::.  ::.||:.:|..|:   ||..||        
plant   350 DICPLYLPNGELADASVDSKIEASFNKLLDRVC--KLRQSMIEENKSVDVPLGEALETFRLVYGV 412

  Fly   216 -------------YVNIEHITKC--------------PVQQEQRPLYVPTGLDNVVDDLIQNMDK 253
                         ..|:|:....              |.:......::|.|.:..|..|.:|:  
plant   413 AEDQQERMLLDWHLANLEYANATLLGNLSMAYWDQDDPYEMGGDHCFIPGGNEIFVHALAENL-- 475

  Fly   254 AQLQTGKPVGQIQWTPAPMKSVGCL---DGSLYNADHIICTLPLGVLKSFAGVLFRPTLPLDKML 315
             .:..|..|..|::     .|.|.|   ....::.|..:||:||||||. ..:.|.|.||..|..
plant   476 -PIFYGSTVESIRY-----GSNGVLVYTGNKEFHCDMALCTVPLGVLKK-GSIEFYPELPHKKKE 533

  Fly   316 AIRNLGFGNPLKIYLSYKKPIGRWLKGSLRPLGTLLNPSVEQQPERNWTQQV---VEISQVPSSQ 377
            ||:.||||                          |||......|...|.:::   ..:::.||::
plant   534 AIQRLGFG--------------------------LLNKVAMLFPCNFWGEEIDTFGRLTEDPSTR 572

  Fly   378 ---------------HVLEVHVGGGYYEEIEKLPDEELLEQITGLLRRCV--SSHLVPYPQELLR 425
                           .:|...|.|...|..|.|...:.::::..:||...  ...:||.|.:.|.
plant   573 GEFFLFYSYSSVSGGPLLVALVAGDAAERFETLSPTDSVKRVLQILRGIYHPKGIVVPDPVQALC 637

  Fly   426 SNWSTSACYLGGRPYFSTNSSARDVQRLAAPLGEKSPGLLFAGDATSLRGFGTIDAARSSGIREA 490
            |.|.......|...|.:..||..|...||..:|:..  :.|||:||:.:...|:..|..||:|||
plant   638 SRWGQDKFSYGSYSYVAVGSSGDDYDILAESVGDGR--VFFAGEATNRQYPATMHGAFLSGMREA 700

  Fly   491 QRII 494
            ..|:
plant   701 ANIL 704

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10561NP_476608.1 Amino_oxidase 48..494 CDD:396255 122/515 (24%)
LDL1NP_176471.1 PLN02328 1..844 CDD:215187 129/524 (25%)

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