DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10561 and Kdm1b

DIOPT Version :10

Sequence 1:NP_476608.1 Gene:CG10561 / 35189 FlyBaseID:FBgn0002036 Length:504 Species:Drosophila melanogaster
Sequence 2:NP_001100813.1 Gene:Kdm1b / 306819 RGDID:1310701 Length:824 Species:Rattus norvegicus


Alignment Length:536 Identity:135/536 - (25%)
Similarity:219/536 - (40%) Gaps:125/536 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 SRRSLYNARVLQADNIGDKQRSPDLEAARQNTQIVVVGAGLAGLSAAQHLLSHGFRRTVILEATD 72
            :|:.|.|..||   .:|..|..  |.....|..::|||||.|||:||:.|.:.|.:.|| |||.|
  Rat   361 TRKGLINTGVL---TVGAGQHL--LPKHYHNKSVLVVGAGPAGLAAARQLHNFGMKVTV-LEAKD 419

  Fly    73 RYGGRI-NTQRFGDTYCELGAKWVKIDGSQDSMYELLRNTEGLG-KQIKQPDRATYLQDGSRI-N 134
            |.|||: :.:.|.......|.:.|  :|..::...|:  .|.|| :..|..:|...:|:|.|| :
  Rat   420 RIGGRVWDDKSFKGVVVGRGPQIV--NGCINNPVALM--CEQLGIRMHKLGERCDLIQEGGRITD 480

  Fly   135 PAMVELIDTLFRQLCRGFKVSERVKTGGDLHSLDNVMNYFRTES---DRIIGVSFQHPKDQLAAR 196
            |.:.:.:|..|..|                  ||.|..:.:.::   |..:|...:         
  Rat   481 PTIDKRMDFHFNAL------------------LDVVSEWRKDKTLLQDVPLGEKIE--------- 518

  Fly   197 EIFQSLFKE----FGSILGCCLEY--VNIEHITKCPVQQ----------------EQRPLYVPTG 239
            ||:::..||    |..:.|..|::  .|:|:.....:.|                ....|..| |
  Rat   519 EIYRAFVKESGIQFSELEGQVLQFHLSNLEYACGSSLHQVSARSWDHNEFFAQFAGDHTLLTP-G 582

  Fly   240 LDNVVDDLIQNMDKAQLQTGKPVGQIQWTPAPMKSVGCLDGSLYNADHIICTLPLGVLKSFAGVL 304
            ...:|:.|.:.:|   ::...||..|.:|...:: |...||.:::|..::.|:||.:|:..| :.
  Rat   583 YSTIVEKLAEGLD---IRLKSPVQSIDYTGDEVQ-VTTTDGVVHSAQKVLVTVPLAMLQRGA-IQ 642

  Fly   305 FRPTLPLDKMLAIRNLGFGNPLKIYLSYKKPIGRWLKGSLRPLGTLLNPSVEQQPERNWTQQVVE 369
            |.|.|...||.||.:||.|...||.|.:                          |.|.|..:|..
  Rat   643 FNPPLSEKKMKAINSLGAGIIEKIALQF--------------------------PYRFWDSKVQG 681

  Fly   370 ---ISQVPSS----------------QHVLEVHVGGGYYEEIEKLPDEELLEQITGLLRRCVSSH 415
               ...||.|                |.||...:.|.....:..:.|:::|:|..|:||......
  Rat   682 ADFFGHVPPSASQRGLFAVFYDMGPQQSVLMSVITGEAVASLRTMDDKQVLQQCLGVLRELFKEQ 746

  Fly   416 LVPYPQELLRSNWSTSACYLGGRPYFST--NSSARDVQRLAAPLGEKSPG-LLFAGDATSLRGFG 477
            .:|.|.:...:.|:|.........:..|  :..|.|:      :.|:..| :.|||:||:.....
  Rat   747 EIPDPTKYFVTRWNTEPWIQMAYSFVKTFGSGEAYDI------IAEEIQGTVYFAGEATNRHFPQ 805

  Fly   478 TIDAARSSGIREAQRI 493
            |:..|..||:|||.:|
  Rat   806 TVTGAYLSGVREASKI 821

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10561NP_476608.1 Amino_oxidase 48..494 CDD:396255 121/496 (24%)
Kdm1bNP_001100813.1 zf-CW 138..191 CDD:462181
PLN02328 <306..821 CDD:215187 134/534 (25%)
Blue background indicates that the domain is not in the aligned region.

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