DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10561 and KDM1B

DIOPT Version :10

Sequence 1:NP_476608.1 Gene:CG10561 / 35189 FlyBaseID:FBgn0002036 Length:504 Species:Drosophila melanogaster
Sequence 2:NP_001426046.1 Gene:KDM1B / 221656 HGNCID:21577 Length:832 Species:Homo sapiens


Alignment Length:538 Identity:132/538 - (24%)
Similarity:209/538 - (38%) Gaps:126/538 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 SRRSLYNARVLQADNIGDKQRSPDLEAARQNTQIVVVGAGLAGLSAAQHLLSHGFRRTVILEATD 72
            :|:.|.|..||   ::|..|..  |.....|..::::|||.|||:||:.|.:.|.:.|| |||.|
Human   366 TRKGLINTGVL---SVGADQYL--LPKDYHNKSVIIIGAGPAGLAAARQLHNFGIKVTV-LEAKD 424

  Fly    73 RYGGRI-NTQRFGDTYCELGAKWVKIDGSQDSMYELLRNTEGLGKQIKQPDRATYLQDGSRI-NP 135
            |.|||: :.:.|.......||:.|  :|..::...|:....|:... |..:|...:|:|.|| :|
Human   425 RIGGRVWDDKSFKGVTVGRGAQIV--NGCINNPVALMCEQLGISMH-KFGERCDLIQEGGRITDP 486

  Fly   136 AMVELIDTLFRQLCRGFKVSERVKTGGDLHSLDNVMNYFRTESDRIIGVSFQHPKDQLAAREIFQ 200
            .:.:.:|..|..|                  || |::.:|.:..::..|....     ...||::
Human   487 TIDKRMDFHFNAL------------------LD-VVSEWRKDKTQLQDVPLGE-----KIEEIYK 527

  Fly   201 SLFKE----FGSILGCCLEY--VNIEHITKCPVQQ----------------EQRPLYVPTGLDNV 243
            :..||    |..:.|..|::  .|:|:.....:.|                ....|..| |...:
Human   528 AFIKESGIQFSELEGQVLQFHLSNLEYACGSNLHQVSARSWDHNEFFAQFAGDHTLLTP-GYSVI 591

  Fly   244 VDDLIQNMDKAQLQTGKPVGQIQWTPAPMKSVGCLDGSLYNADHIICTLPLGVLKSFAGVLFRPT 308
            ::.|.:.:|   :|...|..|..........|...||:.|:|..::.|:||.:|:..| :.|.|.
Human   592 IEKLAEGLD---IQLKSPQVQCIDYSGDEVQVTTTDGTGYSAQKVLVTVPLALLQKGA-IQFNPP 652

  Fly   309 LPLDKMLAIRNLGFGNPLKIYLSYKKPIGRWLKGSLRPLGTLLNPSVEQQPERNWTQQV------ 367
            |...||.||.:||.|...||.|.:                          |.|.|..:|      
Human   653 LSEKKMKAINSLGAGIIEKIALQF--------------------------PYRFWDSKVQGADFF 691

  Fly   368 --------------VEISQVPSSQH-VLEVHVGGGYYEEIEKLPDEELLEQITGLLRRCVSSHLV 417
                          |.....|..:| ||...:.|.....:..|.|:::|:|....||.......|
Human   692 GHVPPSASKRGLFAVFYDMDPQKKHSVLMSVIAGEAVASVRTLDDKQVLQQCMATLRELFKEQEV 756

  Fly   418 PYPQELLRSNWSTSACYLGGRPYFSTNSS-------ARDVQRLAAPLGEKSPGLLFAGDATSLRG 475
            |.|.:...:.|||.........:..|..|       |.|:|..          :.|||:||:...
Human   757 PDPTKYFVTRWSTDPWIQMAYSFVKTGGSGEAYDIIAEDIQGT----------VFFAGEATNRHF 811

  Fly   476 FGTIDAARSSGIREAQRI 493
            ..|:..|..||:|||.:|
Human   812 PQTVTGAYLSGVREASKI 829

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10561NP_476608.1 Amino_oxidase 48..494 CDD:396255 120/498 (24%)
KDM1BNP_001426046.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..47
GLYR1-binding. /evidence=ECO:0000269|PubMed:23260659, ECO:0007744|PDB:4GUR, ECO:0007744|PDB:4GUS, ECO:0007744|PDB:4GUT, ECO:0007744|PDB:4GUU 282..301
Histone H3-binding. /evidence=ECO:0000269|PubMed:23260659, ECO:0000269|PubMed:23266887, ECO:0007744|PDB:4FWF, ECO:0007744|PDB:4GUR, ECO:0007744|PDB:4GUS 447..476 6/31 (19%)
Histone H3-binding. /evidence=ECO:0000269|PubMed:23260659, ECO:0000269|PubMed:23266887, ECO:0007744|PDB:4FWF, ECO:0007744|PDB:4GUR, ECO:0007744|PDB:4GUS 496..507 5/29 (17%)
Histone H3-binding. /evidence=ECO:0000269|PubMed:23260659, ECO:0000269|PubMed:23266887, ECO:0007744|PDB:4FWF, ECO:0007744|PDB:4GUR, ECO:0007744|PDB:4GUS 547..581 3/33 (9%)
GLYR1-binding. /evidence=ECO:0000269|PubMed:23260659, ECO:0007744|PDB:4GUR, ECO:0007744|PDB:4GUS, ECO:0007744|PDB:4GUT, ECO:0007744|PDB:4GUU 573..575 0/1 (0%)
GLYR1-binding. /evidence=ECO:0000269|PubMed:23260659, ECO:0007744|PDB:4GUR, ECO:0007744|PDB:4GUS, ECO:0007744|PDB:4GUT, ECO:0007744|PDB:4GUU 808..824 4/15 (27%)
Blue background indicates that the domain is not in the aligned region.

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