DRSC/TRiP Functional Genomics Resources

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Protein Alignment amd and gadl1

DIOPT Version :10

Sequence 1:NP_476592.1 Gene:amd / 35188 FlyBaseID:FBgn0000075 Length:510 Species:Drosophila melanogaster
Sequence 2:XP_012820293.1 Gene:gadl1 / 733871 XenbaseID:XB-GENE-5721903 Length:522 Species:Xenopus tropicalis


Alignment Length:491 Identity:107/491 - (21%)
Similarity:186/491 - (37%) Gaps:95/491 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 EPGYLLDLLPTEMPEEPEAWKDVLGDISRVIKPGLTHWQSPHMHAYYPTSTSYP----------- 87
            ||..|..||...:.:..|..:.:|.....|||              |...||:|           
 Frog    77 EPEQLKKLLDLNIKDNGEPHEKLLQLCKNVIK--------------YSVKTSHPRFFNQLYAGMD 127

  Fly    88 --SIVGEMLASGFGVIGFSWICSPACTELEVVVMDWLAKFLKLPAHFQHASDGPGGGVIQGSASE 150
              |:....:........:::..||.....|..::..:.:||...         .|.|:.....|.
 Frog   128 HYSLAARFITEALNPSVYTYEVSPVFILTEEAILKKMIEFLGWK---------EGDGIFSPGGSV 183

  Fly   151 AVLVAVLAAREQAVANYRESHPELSESEVRG--RLVAYSSDQSNSCIEKAGVLAAMPIRLLPAGE 213
            :.:.||..||      |:.. |::.:..:..  |||.::|::.:..::||..       .|..|.
 Frog   184 SNMYAVNLAR------YKYC-PDIKQKGLSSAPRLVMFTSEECHYSMKKAAA-------FLGIGT 234

  Fly   214 DFVL------RGDTLRGAIEEDVAAGR----IPVICVATLGTTGTCAYDDIESLSAVCEEFKVWL 268
            :.|.      ||..:...:|..:...:    :|.:..||.|||...|:|.::.::.:||:.|:|.
 Frog   235 ENVYFVKTDDRGKMIPEELENQIQRAKKEAAVPFLVSATSGTTVLGAFDPLDDIANICEKHKLWF 299

  Fly   269 HVDAAYAGGAFALEECSDLRKGLDRVDSLNFNLHKFMLVNFDCSAMWLRDANKVVDS-------- 325
            ||||::.|.|...::......|:.|.||:.:|.||.::....|.|:.:||.:.::..        
 Frog   300 HVDASWGGSALMSQKYRKCLHGIHRADSVAWNPHKMLMAGIQCCALLVRDNSGLLKRCHSAEATY 364

  Fly   326 -FNVDRIYLKHKHEGQSQIPDFRHWQIPLGRRFRALKVWITFRTLGAEGLRNHVRKHIELAKQFE 389
             |..|:.|......|..        .|...||..|.|.|:.::.||..||...:.:.:.|.:...
 Frog   365 LFQQDKFYDVQYDTGDK--------SIQCSRRADAFKFWMMWKALGTTGLEERINRALALTRYLA 421

  Fly   390 QLVLKDSRFELVAPRALGLVCF---------RPKGD------NEITTQLLQRLMDRKKIYMVKAE 439
            ..:.|...|||:........||         ..||.      :.:...:.:|:|.:..:.:....
 Frog   422 SEIKKRDGFELLWEPEYANTCFWYIPPSFRNMEKGPEYWRKFSNVAPTIKERMMKKGSMMVGYQP 486

  Fly   440 HAGR-QFLRFVVCGMDTKASDIDFAWQEIESQLTDL 474
            |..: .|.|.:|........|:||...|||....||
 Frog   487 HRDKVNFFRHIVISPQVSREDMDFVLDEIERLGRDL 522

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
amdNP_476592.1 Pyridoxal_deC 35..414 CDD:395219 90/421 (21%)
gadl1XP_012820293.1 GadA 76..521 CDD:439846 105/488 (22%)

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