DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment amd and CSAD

DIOPT Version :9

Sequence 1:NP_476592.1 Gene:amd / 35188 FlyBaseID:FBgn0000075 Length:510 Species:Drosophila melanogaster
Sequence 2:XP_024304779.1 Gene:CSAD / 51380 HGNCID:18966 Length:620 Species:Homo sapiens


Alignment Length:534 Identity:119/534 - (22%)
Similarity:194/534 - (36%) Gaps:150/534 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 EPGYLLDLLPTEMPEEPEAWKDVLGDISRVIKPGLTHWQSPHMHAYYPTSTSYP----------- 87
            ||..|..||..|:..:.|:.|.:|.....||:              |...|.:|           
Human   144 EPEELKQLLDLELRSQGESQKQILERCRAVIR--------------YSVKTGHPRFFNQLFSGLD 194

  Fly    88 --SIVGEMLASGFGVIGFSWICSPACTELEVVVMDWLAKFLKLPAHFQHAS-DG---PGGGVIQG 146
              ::.|.::........:::..:|....:|..|:      .||.|....:| ||   |||.:   
Human   195 PHALAGRIITESLNTSQYTYEIAPVFVLMEEEVL------RKLRALVGWSSGDGIFCPGGSI--- 250

  Fly   147 SASEAVLVAVLAAREQAVANYRESHPELSESEVR---------------------GRLVAYSSDQ 190
                :.:.||..||.|       .:|:..:..:|                     |.|:..||..
Human   251 ----SNMYAVNLARYQ-------RYPDCKQRGLRTLPPLALFTSKEVGKRHRPNPGLLILISSHV 304

  Fly   191 SNSCIEKAGVLAAMPI-----RLLPAG-----------------------EDFVLRGDTLRGAIE 227
            :.....:.......|.     ||:..|                       |.|:|          
Human   305 TTPSRRELRFWDLAPTVSEWSRLMREGKWSPRIWRGRLVWPRLRLTFHFFETFIL---------- 359

  Fly   228 EDVAAGRIPVICVATLGTTGTCAYDDIESLSAVCEEFKVWLHVDAAYAGGAFALEECSDLRKGLD 292
               .:|.:|.:..||.|||...|:|.:|:::.||:...:|||||||:.|.....:....|..|:.
Human   360 ---DSGAVPFLVSATSGTTVLGAFDPLEAIADVCQRHGLWLHVDAAWGGSVLLSQTHRHLLDGIQ 421

  Fly   293 RVDSLNFNLHKFMLVNFDCSAMWLRDANKVVDSFNVDRIYLKHKHEGQSQ--IPDFRHWQIPL-- 353
            |.||:.:|.||.:.....|||:.|:|.:.:          ||..|..|:.  ....:.:.:.|  
Human   422 RADSVAWNPHKLLAAGLQCSALLLQDTSNL----------LKRCHGSQASYLFQQDKFYDVALDT 476

  Fly   354 -------GRRFRALKVWITFRTLGAEGLRNHVRKHIELAKQFEQLVLKDSRFELVAPRALGLVCF 411
                   |||...||:|:.::..|.:||...:.:...||:...:.:.|...||||.......|||
Human   477 GDKVVQCGRRVDCLKLWLMWKAQGDQGLERRIDQAFVLARYLVEEMKKREGFELVMEPEFVNVCF 541

  Fly   412 -------RPKGD--------NEITTQLLQRLMDRKKIYMVKAEHAGR-QFLRFVVCGMDTKASDI 460
                   |.|.:        :::...|.:|::....:.:....|..| .|.|.||.......:|:
Human   542 WFVPPSLRGKQESPDYHERLSKVAPVLKERMVKEGSMMIGYQPHGTRGNFFRVVVANSALTCADM 606

  Fly   461 DFAWQEIESQLTDL 474
            ||...|:|....||
Human   607 DFLLNELERLGQDL 620

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
amdNP_476592.1 Pyridoxal_deC 35..414 CDD:278699 102/462 (22%)
CSADXP_024304779.1 DOPA_deC_like 185..616 CDD:99743 103/473 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0076
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

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