DRSC/TRiP Functional Genomics Resources

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Protein Alignment amd and csad

DIOPT Version :10

Sequence 1:NP_476592.1 Gene:amd / 35188 FlyBaseID:FBgn0000075 Length:510 Species:Drosophila melanogaster
Sequence 2:NP_001007349.2 Gene:csad / 492476 ZFINID:ZDB-GENE-041114-36 Length:500 Species:Danio rerio


Alignment Length:514 Identity:119/514 - (23%)
Similarity:206/514 - (40%) Gaps:72/514 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MDAKEFREFGKAAIDYIADYLENIRDDDVLPNV----EPGYLLDLLPTEMPEEPEAWKDVLGDIS 61
            ||..:.:.|...|.:.|.:.:.| :..|:...|    :|..|..||..|:.:..|..:.:|..:.
Zfish    19 MDESDGKLFLTEAFNIIMEEILN-KGRDLKEKVCEWKDPDQLRSLLDLELRDHGECHEKLLQRVR 82

  Fly    62 RVIKPGL--THWQSPHMHAYYPTSTSYPSIVGEMLASGFGVIGFSWICSPACTELEVVVMDWLAK 124
            .|.|..:  .|   |...........|.::.|.::........:::..:|....:|..|:..|..
Zfish    83 DVAKYSVKTCH---PRFFNQLFAGVDYHALTGRLITETLNTSQYTYEVAPVFVLMEEEVISKLRS 144

  Fly   125 FLKLPAHFQHASDGPGGGVIQGSASEAVLVAVLAAREQAVANYRESHPELSESEVRG-----RLV 184
            .:         ....|.|:.....|.:.:.|:..||..|       .|::   :.:|     |:.
Zfish   145 LV---------GWSEGDGIFCPGGSMSNMYAINVARYWA-------FPQV---KTKGLWAAPRMA 190

  Fly   185 AYSSDQSNSCIEKAGVLAAMPIRLLPAGED--FVLRGDTLRGAIEEDVAA--------GRIPVIC 239
            .::|.||:..::|...       .|..|.:  |:::.|.....|.||:.|        ..:|...
Zfish   191 IFTSQQSHYSVKKGAA-------FLGIGTENVFIVQVDESGSMIPEDLEAKIVQAKSQDAVPFFV 248

  Fly   240 VATLGTTGTCAYDDIESLSAVCEEFKVWLHVDAAYAGGAFALEECSDLRKGLDRVDSLNFNLHKF 304
            .||.|||...|:|.::.::.:||...:|:|||||:.|.....::...|..|::|.:|:.:|.||.
Zfish   249 NATAGTTVQGAFDPLKRIADICERNGMWMHVDAAWGGSVLFSKKHRHLVAGIERANSVTWNPHKM 313

  Fly   305 MLVNFDCSAMWLRD-ANKVVDSFNVDRIYLKHKHEGQSQIPDFRHWQIPLGRRFRALKVWITFRT 368
            :|....||.:..|| .|.::...:....||..:.:......|.....|..||:...||:|:.::.
Zfish   314 LLTGLQCSVILFRDTTNLLMHCHSAKATYLFQQDKFYDTSLDTGDKSIQCGRKVDCLKLWLMWKA 378

  Fly   369 LGAEGLRNHVRKHIELAKQFEQLVLKDSRFELVAPRALGLVCF-----RPKGD----------NE 418
            :||.||...|.|...|.:...:.:.|...|:||.......|||     ..||.          ::
Zfish   379 IGASGLSQRVDKAFALTRYLVEEMEKRENFQLVCKGPFVNVCFWFIPPSLKGKENSPDYQERLSK 443

  Fly   419 ITTQLLQRLMDRKKI---YMVKAEHAGRQFLRFVVCGMDTKASDIDFAWQEIESQLTDL 474
            :...:.:|:|.|..:   |....||.  .|.|.||........|:||...|:|....||
Zfish   444 VAPVIKERMMKRGTMMVGYQPMDEHV--NFFRMVVVSPQLTTKDMDFFLDEMEKLGKDL 500

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
amdNP_476592.1 Pyridoxal_deC 35..414 CDD:395219 92/401 (23%)
csadNP_001007349.2 GadA 28..499 CDD:439846 114/502 (23%)

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