DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment amd and GADL1

DIOPT Version :9

Sequence 1:NP_476592.1 Gene:amd / 35188 FlyBaseID:FBgn0000075 Length:510 Species:Drosophila melanogaster
Sequence 2:NP_997242.2 Gene:GADL1 / 339896 HGNCID:27949 Length:521 Species:Homo sapiens


Alignment Length:531 Identity:121/531 - (22%)
Similarity:204/531 - (38%) Gaps:120/531 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 DAKEFREFGKAAIDYIADYLENIRDDDVLPNV----EPGYLLDLLPTEMPE--EP-----EAWKD 55
            |||...:|.:.|...|.:.:. ::..||...|    .|..|..||..||.:  ||     |..:|
Human    41 DAKAGEKFVEEACRLIMEEVV-LKATDVNEKVCEWRPPEQLKQLLDLEMRDSGEPPHKLLELCRD 104

  Fly    56 VLGDISRVIKPGLTHWQSPHMHAYYPTSTSYP-------------SIVGEMLASGFGVIGFSWIC 107
            |:                     :|...|::|             |:|...:........:::..
Human   105 VI---------------------HYSVKTNHPRFFNQLYAGLDYYSLVARFMTEALNPSVYTYEV 148

  Fly   108 SPACTELEVVVMDWLAKFLKLPAHFQHASDG---PGGGVIQGSASEAVLVAVLAAREQAVANYRE 169
            ||....:|..|:..:.:|:.     ....||   |||.|....|..             :|.|:.
Human   149 SPVFLLVEEAVLKKMIEFIG-----WKEGDGIFNPGGSVSNMYAMN-------------LARYKY 195

  Fly   170 SHPELSESEVRG--RLVAYSSDQSNSCIEKAGVLAAMPIRLLPAGEDFVL------RGDTLRGAI 226
            . |::.|..:.|  ||:.::|.:.:..::||.       ..|..|.:.|.      ||..:...:
Human   196 C-PDIKEKGLSGSPRLILFTSAECHYSMKKAA-------SFLGIGTENVCFVETDGRGKMIPEEL 252

  Fly   227 EEDV----AAGRIPVICVATLGTTGTCAYDDIESLSAVCEEFKVWLHVDAAYAGGAFALEECSDL 287
            |:.|    ..|..|.:..||.|||...|:|.::.::.:||...:||||||::.|.|....:...|
Human   253 EKQVWQARKEGAAPFLVCATSGTTVLGAFDPLDEIADICERHSLWLHVDASWGGSALMSRKHRKL 317

  Fly   288 RKGLDRVDSLNFNLHKFMLVNFDCSAMWLRDANKVVDS---------FNVDRIYLKHKHEGQSQI 343
            ..|:.|.||:.:|.||.::....|.|:.::|.:.::..         |..|:.|......|..  
Human   318 LHGIHRADSVAWNPHKMLMAGIQCCALLVKDKSDLLKKCYSAKASYLFQQDKFYDVSYDTGDK-- 380

  Fly   344 PDFRHWQIPLGRRFRALKVWITFRTLGAEGLRNHVRKHIELAKQFEQLVLKDSRFELVAPRALGL 408
                  .|...||..|.|.|:|::.||..||...|.:.:.|::.....:.|...|:|:.......
Human   381 ------SIQCSRRPDAFKFWMTWKALGTLGLEERVNRALALSRYLVDEIKKREGFKLLMEPEYAN 439

  Fly   409 VCF---------RPKGD------NEITTQLLQRLMDRKKIYMVKAEHAGR-QFLRFVVCGMDTKA 457
            :||         ..:|.      |.:...:.:|:|.:..:.:....|.|: .|.|.||.......
Human   440 ICFWYIPPSLREMEEGPEFWAKLNLVAPAIKERMMKKGSLMLGYQPHRGKVNFFRQVVISPQVSR 504

  Fly   458 SDIDFAWQEIE 468
            .|:||...||:
Human   505 EDMDFLLDEID 515

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
amdNP_476592.1 Pyridoxal_deC 35..414 CDD:278699 97/431 (23%)
GADL1NP_997242.2 AAT_I 77..445 CDD:302748 97/422 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0076
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

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