DRSC/TRiP Functional Genomics Resources

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Protein Alignment amd and GAD1

DIOPT Version :10

Sequence 1:NP_476592.1 Gene:amd / 35188 FlyBaseID:FBgn0000075 Length:510 Species:Drosophila melanogaster
Sequence 2:NP_000808.2 Gene:GAD1 / 2571 HGNCID:4092 Length:594 Species:Homo sapiens


Alignment Length:523 Identity:133/523 - (25%)
Similarity:217/523 - (41%) Gaps:99/523 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 EFGKAAIDYIADYLENI--RDDDVLPNVEPGYLLDLLP---TEMPEEPEAWKDVLGDISRVIKPG 67
            :|....:|.:.:|:...  |...||....|..||:.:.   .|:.:.||:.:.:|.|....:|  
Human   115 QFLLEVVDILLNYVRKTFDRSTKVLDFHHPHQLLEGMEGFNLELSDHPESLEQILVDCRDTLK-- 177

  Fly    68 LTHWQSPHMHAYYPTSTSYPSIVGEMLASGFGVIGFS--WICSPACTEL---EV----VVMDWLA 123
                        |...|.:|....: |::|..:||.:  |:.|.|.|.:   |:    |:|:.:.
Human   178 ------------YGVRTGHPRFFNQ-LSTGLDIIGLAGEWLTSTANTNMFTYEIAPVFVLMEQIT 229

  Fly   124 KFLKLPAHFQHASDGPGGGVIQGSASEAVLVAVLAAREQAVANYRESHPELSESEVRG-----RL 183
              ||........|...|.|:.....:.:.:.:::|||          :....|.:.:|     :|
Human   230 --LKKMREIVGWSSKDGDGIFSPGGAISNMYSIMAAR----------YKYFPEVKTKGMAAVPKL 282

  Fly   184 VAYSSDQSNSCIEKAGVLAAMPIRLLPAGEDFVL------RGDTLRGAIE----EDVAAGRIPVI 238
            |.::|:||:..|:|||.       .|..|.|.|:      ||..:....|    |....|.:|..
Human   283 VLFTSEQSHYSIKKAGA-------ALGFGTDNVILIKCNERGKIIPADFEAKILEAKQKGYVPFY 340

  Fly   239 CVATLGTTGTCAYDDIESLSAVCEEFKVWLHVDAAYAGGAFALEECSDLRKGLDRVDSLNFNLHK 303
            ..||.|||...|:|.|:.::.:||::.:|||||||:.||.....:......|::|.:|:.:|.||
Human   341 VNATAGTTVYGAFDPIQEIADICEKYNLWLHVDAAWGGGLLMSRKHRHKLNGIERANSVTWNPHK 405

  Fly   304 FMLVNFDCSAMWLRD------ANKVVDS--FNVDRIYLKHKHEGQSQIPDFRHWQIPLGRRFRAL 360
            .|.|...|||:.:::      .|::...  |..|:.|......|...|...||..|        .
Human   406 MMGVLLQCSAILVKEKGILQGCNQMCAGYLFQPDKQYDVSYDTGDKAIQCGRHVDI--------F 462

  Fly   361 KVWITFRTLGAEGLRNHVRKHIELAKQFEQLVLKDSRFELV---APRALGLVCF-------RPKG 415
            |.|:.::..|..|..|.:.|.:|||:.....:.....||:|   .|.... |||       |...
Human   463 KFWLMWKAKGTVGFENQINKCLELAEYLYAKIKNREEFEMVFNGEPEHTN-VCFWYIPQSLRGVP 526

  Fly   416 DNEITTQLLQRLMDRKKIYMVKA--EHAGRQ-------FLRFVVCGMDTKASDIDFAWQEIESQL 471
            |:....:.|.::..:.|..|:::  ...|.|       |.|.|:.......|||||..:|||...
Human   527 DSPQRREKLHKVAPKIKALMMESGTTMVGYQPQGDKANFFRMVISNPAATQSDIDFLIEEIERLG 591

  Fly   472 TDL 474
            .||
Human   592 QDL 594

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
amdNP_476592.1 Pyridoxal_deC 35..414 CDD:395219 108/423 (26%)
GAD1NP_000808.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..23
Pyridoxal_deC 144..518 CDD:395219 107/416 (26%)
Blue background indicates that the domain is not in the aligned region.

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